Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755779

Identifier: 170755779

GI number: 170755779

Start: 1232568

End: 1233545

Strand: Direct

Name: 170755779

Synonym: CLD_3455

Alternate gene names: NA

Gene position: 1232568-1233545 (Clockwise)

Preceding gene: 170755837

Following gene: 170756755

Centisome position: 31.14

GC content: 21.78

Gene sequence:

>978_bases
ATGAGCAAACCTATTATACATACATATATAAGTAGATTTGAAAATAAAGAAAAAATATTTAAATATAATTTAGATCTATA
TCAATGTAAAAATATAAGTAAATTATATTACTACACTAGCATAAGTACTTTAGAAAATATAATAAGTAAGGAAAATATTT
GGCTATCTAATAGTAAGTATCTTAATGATAGTACAGAAATAAATTATACCAACAATTTGATTTATGATATATGTGAAGAA
TATTTGAATAGAAATGAAGAATTTGATAAATTTTTCAAAGAAAATATAGAGATTTTGCTGCATACTATAGATATGGAATT
AGGGGATACTTACATATTATCTCTTACTGAAAATAAAGATTCATTGGCTCTTTGGTCTAATTATTCTAATTATGATGGAT
ATAATTTAGCATTTAATTGTGATTATTTTCAGAATATATTTACAGAAGAAAATTATAGGTTTATAGATAAAAATAAAAAT
TCTATTTTCTTAAATGAGGGGGAAGATTTTGTATGGTATTTTGGAGAGGTTATATATAACAAGGAACATCAGGAAAATAT
AATAAAGGAAAGAGTAGAATTTTTATATAATTTATATAAAAATTTTTATGAATTTAAAGAGGATGATGATTTTAAATCTT
TAATAGTGTATGTGCTCTATAATATAGCTTATATAGCTACTTTTTTTAAAGATGAGAGTTTTAAAGAGGAACAAGAACAT
AGGTTAGTGTTTAGAGTTATTAATAAAAATATAAAAAAGCAAATAGTAAAACATAGAATTTCAAATAGAGTTTTTATTCC
TTATATAGAATTAGGTCTTAATCAAAATACAAAAGAAGGTAATTTACCTGTAGAGAAGATAACTATAGGTCCTAAAAATA
ATTTAGATATTGCAGAAATGGGCTTGAGATCTTTTTTAGAAAGTGAAGGATATTATAAAATAACTATAAAAAAATCTAAG
ATACCTTTAAGATATTAA

Upstream 100 bases:

>100_bases
AATGTAAATAAAATATTTTCTAAAGGATAAGAATAATAAGTAAAAGCTATGATAGAAATCATAGCTTTTATAAATTTACG
TTAAATGAGGTATTGATATT

Downstream 100 bases:

>100_bases
AATTTATAAAGATGTAAGTAAGTATAAGTTAGAAATGGGAATATAATAAGTGTAGAATTATAAGTTTGAAGTTGTAGATG
GAAGATTGTAGTTGATAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MSKPIIHTYISRFENKEKIFKYNLDLYQCKNISKLYYYTSISTLENIISKENIWLSNSKYLNDSTEINYTNNLIYDICEE
YLNRNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKDSLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKN
SIFLNEGEDFVWYFGEVIYNKEHQENIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEH
RLVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEMGLRSFLESEGYYKITIKKSK
IPLRY

Sequences:

>Translated_325_residues
MSKPIIHTYISRFENKEKIFKYNLDLYQCKNISKLYYYTSISTLENIISKENIWLSNSKYLNDSTEINYTNNLIYDICEE
YLNRNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKDSLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKN
SIFLNEGEDFVWYFGEVIYNKEHQENIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEH
RLVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEMGLRSFLESEGYYKITIKKSK
IPLRY
>Mature_324_residues
SKPIIHTYISRFENKEKIFKYNLDLYQCKNISKLYYYTSISTLENIISKENIWLSNSKYLNDSTEINYTNNLIYDICEEY
LNRNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKDSLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKNS
IFLNEGEDFVWYFGEVIYNKEHQENIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEHR
LVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEMGLRSFLESEGYYKITIKKSKI
PLRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39286; Mature: 39155

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPIIHTYISRFENKEKIFKYNLDLYQCKNISKLYYYTSISTLENIISKENIWLSNSKY
CCCCHHHHHHHHHCCCCCEEEECCCHHHHCCCCEEEEEEEHHHHHHHHHHCCEEECCCCC
LNDSTEINYTNNLIYDICEEYLNRNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKD
CCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCCC
SLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKNSIFLNEGEDFVWYFGEVIYN
CEEEECCCCCCCCEEEEEECHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEEHHHHHC
KEHQENIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEH
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RLVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEM
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHH
GLRSFLESEGYYKITIKKSKIPLRY
HHHHHHHCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
SKPIIHTYISRFENKEKIFKYNLDLYQCKNISKLYYYTSISTLENIISKENIWLSNSKY
CCCHHHHHHHHHCCCCCEEEECCCHHHHCCCCEEEEEEEHHHHHHHHHHCCEEECCCCC
LNDSTEINYTNNLIYDICEEYLNRNEEFDKFFKENIEILLHTIDMELGDTYILSLTENKD
CCCCCCEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCCEEEEEEECCCC
SLALWSNYSNYDGYNLAFNCDYFQNIFTEENYRFIDKNKNSIFLNEGEDFVWYFGEVIYN
CEEEECCCCCCCCEEEEEECHHHHHHHCCCCEEEEECCCCEEEEECCCCEEEEEHHHHHC
KEHQENIIKERVEFLYNLYKNFYEFKEDDDFKSLIVYVLYNIAYIATFFKDESFKEEQEH
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RLVFRVINKNIKKQIVKHRISNRVFIPYIELGLNQNTKEGNLPVEKITIGPKNNLDIAEM
HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCCCHHHH
GLRSFLESEGYYKITIKKSKIPLRY
HHHHHHHCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA