| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is 170755753
Identifier: 170755753
GI number: 170755753
Start: 774359
End: 776053
Strand: Direct
Name: 170755753
Synonym: CLD_0108
Alternate gene names: NA
Gene position: 774359-776053 (Clockwise)
Preceding gene: 170754217
Following gene: 170756392
Centisome position: 19.56
GC content: 25.96
Gene sequence:
>1695_bases GTGAAAAGAATACCTTATGGGATTTCTAACTTTGAAGTTTTAAGAGAAAAGAATTATCTTTATGTGGATAAGACTTCTTA TATAGAGTTATTAGATAGATATGCTCCCTATAATTTTTTTATAAGACCTAGAAGATTTGGTAAAAGTCTTTTTATATCTA TGCTTGAAAATTATTATGATATAAATAAAAAAGACAAATTTGAAAAACTATTTGGTGATTTATATATAGGTAAAAATCCT ACAGAAGAGAGAAATAGTTTTCTTGTATGGAAAATAAGTTTTGCTGGAGTAGATGCAGGACATGGTGAAGAAGAATTAAG AAATAGTTTTAACTCAAAAGTTTTGTTATCTGCAATAAAATTTATAAATAAATACTCAAATTTATTAGATGTTGATACTA TTCCAAAAGGAATGGAAAGTGCAGAAGTAATAGTACAATATATATCTTTATTAGCTAGTAAAATAAATATACCTGTATTT GTTTTAATAGATGAATATGATAATTTTGCTAATGAATTGATTACAGGGGGAAAACAAAGTACTTATAGTGGAATACTTCA TGGTGAGGGTTTTGTGAAGGTATTTTATAAAGCTATAAAAGATTCTACAGCAGATAATTTTAATAGAATATTTATGACTG GGGTAAGTCCAATAATGCTAGATGATTTAACTAGCGGATTTAACATAACAAGGAACTATACTTTAGATAAAAATCTTAAT GCTATGATGGGATTTACACAAGACGAAATTTATTCTATTATGGATCAAGTTGGAATAACAGATAAACCAATTAGAGAAAA GATATATACAGATATGAAGCAATATTATAATGGATATAAATTTAATGAAGACAGCAAATCAGTTTTTAATCCAGATATGT CTATGTATTTTTTAGATAATTATTTGGCTTATAATGAGTATCCTAAAGAAATGATAGATAATAATGTGAAAACTGATTAT GGAAAAGTTAATCAGTTAGCTTATAATTTTAACGATAGAGAAGCTCTAGAAGAAATAATGACAACAGGAGAAACCTCTAC TATGTTAGTAGATAGATTTAATATTCATACTATGTATAGTGTGAAAGAAAACTTTAAATCCTTATTATTTTATCTTGGAA TGCTTACTATAAAAGAGCAAGGCCTACTTGGTACAGTTTTAAAGATACCTAACTATGTTATAAAAACAATATATTGGGAG CAATATTTTCAAAGAATAAATGAAGATTATAGTATACAAATACAAAAGGTAAGAATAGCTGTTAATGAAATGAGAACAAA TGGAAATATTCATCCTTTGATGGAACTTGTAGGTACTATATTAGAGGATTTATCTAATAGAGATTTAATAAAAATGGATG AAAAAAATATAAAAATGATGCTTCTTACACTATTAGGTGTAGACAGTACATATTTTATAAAAAGTGAAGATGAGAATAAT AATGGCTATGTAGATATAATGCTTAAAAGAAAGATTCAGTTTAAGGATATAACTAAATTCCAATGGATTATAGAGTTAAA ATATATAAAAGAAAGTGATAAAAATACATTTGAAAAAGTAAAAAAAGAAGGACTAAAGCAGCTTCAAGGATATGCTGAAA GTAAAATGGTTCAGGAGGAACTTGGAGTGGAGGATTTAAAGAAGGTATTAATTCTTGTGGTAGGAAAAAAAGATATTTAT ACTGTAGATTTATAA
Upstream 100 bases:
>100_bases TTATTAAATATAGGGTATACTATAAATAAAATAAACAAAATTAAATACTAAGAAATAGATTGGTAAAGAATAGATGAAAT TAAATGAGGAGTGATGGTAA
Downstream 100 bases:
>100_bases AAAATTATAATTATAATAAAAAGCATTTAACCTTATAGGGAGAATGCTTTTTGTTTGAAATTTACAGGATATGATTATAT AACTTAACATGTTGCTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MKRIPYGISNFEVLREKNYLYVDKTSYIELLDRYAPYNFFIRPRRFGKSLFISMLENYYDINKKDKFEKLFGDLYIGKNP TEERNSFLVWKISFAGVDAGHGEEELRNSFNSKVLLSAIKFINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVF VLIDEYDNFANELITGGKQSTYSGILHGEGFVKVFYKAIKDSTADNFNRIFMTGVSPIMLDDLTSGFNITRNYTLDKNLN AMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYKFNEDSKSVFNPDMSMYFLDNYLAYNEYPKEMIDNNVKTDY GKVNQLAYNFNDREALEEIMTTGETSTMLVDRFNIHTMYSVKENFKSLLFYLGMLTIKEQGLLGTVLKIPNYVIKTIYWE QYFQRINEDYSIQIQKVRIAVNEMRTNGNIHPLMELVGTILEDLSNRDLIKMDEKNIKMMLLTLLGVDSTYFIKSEDENN NGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTFEKVKKEGLKQLQGYAESKMVQEELGVEDLKKVLILVVGKKDIY TVDL
Sequences:
>Translated_564_residues MKRIPYGISNFEVLREKNYLYVDKTSYIELLDRYAPYNFFIRPRRFGKSLFISMLENYYDINKKDKFEKLFGDLYIGKNP TEERNSFLVWKISFAGVDAGHGEEELRNSFNSKVLLSAIKFINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVF VLIDEYDNFANELITGGKQSTYSGILHGEGFVKVFYKAIKDSTADNFNRIFMTGVSPIMLDDLTSGFNITRNYTLDKNLN AMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYKFNEDSKSVFNPDMSMYFLDNYLAYNEYPKEMIDNNVKTDY GKVNQLAYNFNDREALEEIMTTGETSTMLVDRFNIHTMYSVKENFKSLLFYLGMLTIKEQGLLGTVLKIPNYVIKTIYWE QYFQRINEDYSIQIQKVRIAVNEMRTNGNIHPLMELVGTILEDLSNRDLIKMDEKNIKMMLLTLLGVDSTYFIKSEDENN NGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTFEKVKKEGLKQLQGYAESKMVQEELGVEDLKKVLILVVGKKDIY TVDL >Mature_564_residues MKRIPYGISNFEVLREKNYLYVDKTSYIELLDRYAPYNFFIRPRRFGKSLFISMLENYYDINKKDKFEKLFGDLYIGKNP TEERNSFLVWKISFAGVDAGHGEEELRNSFNSKVLLSAIKFINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVF VLIDEYDNFANELITGGKQSTYSGILHGEGFVKVFYKAIKDSTADNFNRIFMTGVSPIMLDDLTSGFNITRNYTLDKNLN AMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYKFNEDSKSVFNPDMSMYFLDNYLAYNEYPKEMIDNNVKTDY GKVNQLAYNFNDREALEEIMTTGETSTMLVDRFNIHTMYSVKENFKSLLFYLGMLTIKEQGLLGTVLKIPNYVIKTIYWE QYFQRINEDYSIQIQKVRIAVNEMRTNGNIHPLMELVGTILEDLSNRDLIKMDEKNIKMMLLTLLGVDSTYFIKSEDENN NGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTFEKVKKEGLKQLQGYAESKMVQEELGVEDLKKVLILVVGKKDIY TVDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018631 - InterPro: IPR012547 [H]
Pfam domain/function: PF09820 AAA-ATPase_like; PF08011 DUF1703 [H]
EC number: NA
Molecular weight: Translated: 65901; Mature: 65901
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIPYGISNFEVLREKNYLYVDKTSYIELLDRYAPYNFFIRPRRFGKSLFISMLENYYD CCCCCCCCCCHHHHHCCCEEEEECHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHC INKKDKFEKLFGDLYIGKNPTEERNSFLVWKISFAGVDAGHGEEELRNSFNSKVLLSAIK CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHH FINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVFVLIDEYDNFANELITGGKQS HHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCC TYSGILHGEGFVKVFYKAIKDSTADNFNRIFMTGVSPIMLDDLTSGFNITRNYTLDKNLN CCCCEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEEECCCCH AMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYKFNEDSKSVFNPDMSMYFLDN HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEHHHHH YLAYNEYPKEMIDNNVKTDYGKVNQLAYNFNDREALEEIMTTGETSTMLVDRFNIHTMYS HHHHCCCCHHHHCCCCCCCCCCHHHEEECCCHHHHHHHHHHCCCCCEEEEEECCCEEHHH VKENFKSLLFYLGMLTIKEQGLLGTVLKIPNYVIKTIYWEQYFQRINEDYSIQIQKVRIA HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE VNEMRTNGNIHPLMELVGTILEDLSNRDLIKMDEKNIKMMLLTLLGVDSTYFIKSEDENN HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCC NGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTFEKVKKEGLKQLQGYAESKMVQEE CCEEEEEEECCCCCHHCCCEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGVEDLKKVLILVVGKKDIYTVDL CCHHHHHHHHEEEECCCCEEEECC >Mature Secondary Structure MKRIPYGISNFEVLREKNYLYVDKTSYIELLDRYAPYNFFIRPRRFGKSLFISMLENYYD CCCCCCCCCCHHHHHCCCEEEEECHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHC INKKDKFEKLFGDLYIGKNPTEERNSFLVWKISFAGVDAGHGEEELRNSFNSKVLLSAIK CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHCCHHHHHHHHH FINKYSNLLDVDTIPKGMESAEVIVQYISLLASKINIPVFVLIDEYDNFANELITGGKQS HHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCC TYSGILHGEGFVKVFYKAIKDSTADNFNRIFMTGVSPIMLDDLTSGFNITRNYTLDKNLN CCCCEECCCHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHCCCCCCEEEEEEECCCCH AMMGFTQDEIYSIMDQVGITDKPIREKIYTDMKQYYNGYKFNEDSKSVFNPDMSMYFLDN HHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEHHHHH YLAYNEYPKEMIDNNVKTDYGKVNQLAYNFNDREALEEIMTTGETSTMLVDRFNIHTMYS HHHHCCCCHHHHCCCCCCCCCCHHHEEECCCHHHHHHHHHHCCCCCEEEEEECCCEEHHH VKENFKSLLFYLGMLTIKEQGLLGTVLKIPNYVIKTIYWEQYFQRINEDYSIQIQKVRIA HHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEE VNEMRTNGNIHPLMELVGTILEDLSNRDLIKMDEKNIKMMLLTLLGVDSTYFIKSEDENN HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCCCCC NGYVDIMLKRKIQFKDITKFQWIIELKYIKESDKNTFEKVKKEGLKQLQGYAESKMVQEE CCEEEEEEECCCCCHHCCCEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGVEDLKKVLILVVGKKDIYTVDL CCHHHHHHHHEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2388847 [H]