| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755752
Identifier: 170755752
GI number: 170755752
Start: 3105119
End: 3106204
Strand: Reverse
Name: 170755752
Synonym: CLD_1671
Alternate gene names: NA
Gene position: 3106204-3105119 (Counterclockwise)
Preceding gene: 170755490
Following gene: 170756805
Centisome position: 78.47
GC content: 26.34
Gene sequence:
>1086_bases GTGGCTTTTATAATATTAGGAACATCTATAGTATCATTAAAAACTTATCCAGAAGTATTTATTGTAAATGGCAGGAATAG TAGTTGGGTGGCTACTATAATAGCTTCATTGATTATATTTTTATATTATCTATATATAATCAATATAAGTAAAAAAATTT GTAAACATAGTTTATGGGAGGTTTATGAATATGCCTTAGGAAAGCGCTTAGGAAAATTGTTTCAGTTTACATTTTGCTTG GGATTATTTTTTTCTCTTTTAGAGTCTTGCAGTGTAGATGCTAATGCTATGAATACTAATTTACTTCAAAATACTCCACC TTGGTTTTTTGTAGTAACATTTATATTAAGTGCTAATTATGTATTATTAAAAGGAGAAAGAGCTGTAATCTTGATGAGTC TAATTGGAATAACCTTTATTTGTATAGCGGGTATAAATTTAGTAATACTTACGGCTAAGTATAAAACTTTTAAGTATTTA CTTCCAGTGTTTCCTAATGGTATAGAAAAAGGCTTTATAATAAGTATACTTCAAGTGCTAGGGTTATATGGATGTGTAGC TATAGCATATCCGTATTTTCAAGGAATTAAAGATAAAAAATCTGCTTTAAAAGGGGCAAGTATAGGATTACTTATAGTTA TACAGATGATAATAGTATCTGTAACAGGAGTAATATCTACTTTTGGAACTAATAGAGCTGTAACATTAGCTTATCCTAAG CTTATTCAAACTCAACTAGTAAGTTATTCAGGGTTTTTAGAAAGTGGAGAATTATTTGTTATGCTTCAAATGTTGGCAGG TTGGTTTGTAAAGTATGTATTAAGTTTTCAGGCTTTATTACATTTGCTAAAACATTTTAAAATAGAAGATAAAAAGCAAA AGGTAACTATATGGGTATTAAATATTATAGTAATGATTATATGCTTGTTTATGGCAAAAAATACTTATAAATTATTATAC ATATTAGCCTTCTATCCACTTATATACTTAACTTTTTTTATAATAATACCATTTATAATTTTTACTATAGCTTTAATAAG AAATAAGATAAAGCAAAATTCATATGACGTTAAAAATATTAATTAA
Upstream 100 bases:
>100_bases TTATTAGTAATAAGAAGAATAATATTCTATTATAGGTCAAGAATTAAAATATTATAAAATATAAGGAGGAATAAAAATTT TCAAGTTAAATTCAAAACAT
Downstream 100 bases:
>100_bases TAAAGTCAAATGGGAAAAATACAATTATTTACAAATTATTTATAATATTATTTATGATATAATAATATTATAGATATTCT ATTTATAAGGGGTGAAGAGC
Product: spore germination protein
Products: NA
Alternate protein names: Spore Germination /KB
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MAFIILGTSIVSLKTYPEVFIVNGRNSSWVATIIASLIIFLYYLYIINISKKICKHSLWEVYEYALGKRLGKLFQFTFCL GLFFSLLESCSVDANAMNTNLLQNTPPWFFVVTFILSANYVLLKGERAVILMSLIGITFICIAGINLVILTAKYKTFKYL LPVFPNGIEKGFIISILQVLGLYGCVAIAYPYFQGIKDKKSALKGASIGLLIVIQMIIVSVTGVISTFGTNRAVTLAYPK LIQTQLVSYSGFLESGELFVMLQMLAGWFVKYVLSFQALLHLLKHFKIEDKKQKVTIWVLNIIVMIICLFMAKNTYKLLY ILAFYPLIYLTFFIIIPFIIFTIALIRNKIKQNSYDVKNIN
Sequences:
>Translated_361_residues MAFIILGTSIVSLKTYPEVFIVNGRNSSWVATIIASLIIFLYYLYIINISKKICKHSLWEVYEYALGKRLGKLFQFTFCL GLFFSLLESCSVDANAMNTNLLQNTPPWFFVVTFILSANYVLLKGERAVILMSLIGITFICIAGINLVILTAKYKTFKYL LPVFPNGIEKGFIISILQVLGLYGCVAIAYPYFQGIKDKKSALKGASIGLLIVIQMIIVSVTGVISTFGTNRAVTLAYPK LIQTQLVSYSGFLESGELFVMLQMLAGWFVKYVLSFQALLHLLKHFKIEDKKQKVTIWVLNIIVMIICLFMAKNTYKLLY ILAFYPLIYLTFFIIIPFIIFTIALIRNKIKQNSYDVKNIN >Mature_360_residues AFIILGTSIVSLKTYPEVFIVNGRNSSWVATIIASLIIFLYYLYIINISKKICKHSLWEVYEYALGKRLGKLFQFTFCLG LFFSLLESCSVDANAMNTNLLQNTPPWFFVVTFILSANYVLLKGERAVILMSLIGITFICIAGINLVILTAKYKTFKYLL PVFPNGIEKGFIISILQVLGLYGCVAIAYPYFQGIKDKKSALKGASIGLLIVIQMIIVSVTGVISTFGTNRAVTLAYPKL IQTQLVSYSGFLESGELFVMLQMLAGWFVKYVLSFQALLHLLKHFKIEDKKQKVTIWVLNIIVMIICLFMAKNTYKLLYI LAFYPLIYLTFFIIIPFIIFTIALIRNKIKQNSYDVKNIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40964; Mature: 40833
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIILGTSIVSLKTYPEVFIVNGRNSSWVATIIASLIIFLYYLYIINISKKICKHSLWE CEEEEEECHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYEYALGKRLGKLFQFTFCLGLFFSLLESCSVDANAMNTNLLQNTPPWFFVVTFILSANY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHCCCCCHHHHHHHHHHCCE VLLKGERAVILMSLIGITFICIAGINLVILTAKYKTFKYLLPVFPNGIEKGFIISILQVL EEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHH GLYGCVAIAYPYFQGIKDKKSALKGASIGLLIVIQMIIVSVTGVISTFGTNRAVTLAYPK HHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH LIQTQLVSYSGFLESGELFVMLQMLAGWFVKYVLSFQALLHLLKHFKIEDKKQKVTIWVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NIIVMIICLFMAKNTYKLLYILAFYPLIYLTFFIIIPFIIFTIALIRNKIKQNSYDVKNI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC N C >Mature Secondary Structure AFIILGTSIVSLKTYPEVFIVNGRNSSWVATIIASLIIFLYYLYIINISKKICKHSLWE EEEEEECHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYEYALGKRLGKLFQFTFCLGLFFSLLESCSVDANAMNTNLLQNTPPWFFVVTFILSANY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHCCCCCHHHHHHHHHHCCE VLLKGERAVILMSLIGITFICIAGINLVILTAKYKTFKYLLPVFPNGIEKGFIISILQVL EEEECCHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHH GLYGCVAIAYPYFQGIKDKKSALKGASIGLLIVIQMIIVSVTGVISTFGTNRAVTLAYPK HHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHH LIQTQLVSYSGFLESGELFVMLQMLAGWFVKYVLSFQALLHLLKHFKIEDKKQKVTIWVL HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH NIIVMIICLFMAKNTYKLLYILAFYPLIYLTFFIIIPFIIFTIALIRNKIKQNSYDVKNI HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA