| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755744
Identifier: 170755744
GI number: 170755744
Start: 878413
End: 878586
Strand: Direct
Name: 170755744
Synonym: CLD_0002
Alternate gene names: NA
Gene position: 878413-878586 (Clockwise)
Preceding gene: 170754723
Following gene: 170756774
Centisome position: 22.19
GC content: 32.18
Gene sequence:
>174_bases TTGGATGGAAAAGTATTCAAAGTATCTGAAAAAGAAATAGGAGTTAATGCTCCACCGTTTCATCCCAATTACAGAACTAC AATAATTCCTTACTTCCCAGATACATTAGATATAGAAAGAATAGCTAGAGATTATGAAGGTGAGGTTTATTATGTAGATG GGTTTATTATGTAG
Upstream 100 bases:
>100_bases GAACGCGATTTTTGCTAACAGCTATATTGGAAGTGGAGTTGTTAAAGAATATGAAATACTTGCTACTTTAGACTTACATA CGAGTAAAATATGTAGATTA
Downstream 100 bases:
>100_bases ATGGAGAAATCAATTATAAACAATGGTATGAGAAATATGTTGCTTAAGTTTGAGAACTTATTAAGGAGAATAGTGGAAAT TCGTTTAGTGATTAGGGTAT
Product: putative prophage head protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MDGKVFKVSEKEIGVNAPPFHPNYRTTIIPYFPDTLDIERIARDYEGEVYYVDGFIM
Sequences:
>Translated_57_residues MDGKVFKVSEKEIGVNAPPFHPNYRTTIIPYFPDTLDIERIARDYEGEVYYVDGFIM >Mature_57_residues MDGKVFKVSEKEIGVNAPPFHPNYRTTIIPYFPDTLDIERIARDYEGEVYYVDGFIM
Specific function: Unknown
COG id: COG5585
COG function: function code T; NAD+--asparagine ADP-ribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6659; Mature: 6659
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGKVFKVSEKEIGVNAPPFHPNYRTTIIPYFPDTLDIERIARDYEGEVYYVDGFIM CCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEEEEEC >Mature Secondary Structure MDGKVFKVSEKEIGVNAPPFHPNYRTTIIPYFPDTLDIERIARDYEGEVYYVDGFIM CCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA