Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170755587

Identifier: 170755587

GI number: 170755587

Start: 2320573

End: 2320917

Strand: Reverse

Name: 170755587

Synonym: CLD_2456

Alternate gene names: NA

Gene position: 2320917-2320573 (Counterclockwise)

Preceding gene: 170757238

Following gene: 170755699

Centisome position: 58.64

GC content: 29.86

Gene sequence:

>345_bases
ATGAAAATTAATGGAGCGGAATTAAAAGATTTAGATATTTTAGACCTTGAAGTTGCTGAAAAATATGAAAAAGCAATTAA
GGGTATTGACGGAATAGCTGAAAAAGTACAAGGCATGACAATAGCTGATAGTGTTAGAACACAATGTAATGCTATATTTA
AGATTTTTAACGATCTGTTTGGTGAAGGTACAGATAAAAAAATATTCGGGAATAAAGTCAATTTATTAACTTGTTTACAA
GCTTTTGATGAGCTTATAACTCAAACAAATGCATCTCGTGCAGAAGTTGAAAAAATAGCTAACAAATATTCTCCTAATAG
GGCAGCTAGAAGAAAGAAAAAATAA

Upstream 100 bases:

>100_bases
AGTATTCCCAAACCAATGAAGTATTTTTATCTAACAAAATATCACCCCTTTCAATAATATTTTAACATTTATCGGGGAGA
AACAACACAGGAGGTATAAT

Downstream 100 bases:

>100_bases
TGAATGTGCTAATAGATTTGGTACCAACTACAATTGAAATAGAGGGTGAGGAGTATGAGATTAACTCTAACTTTAGAGTG
TCCATACTCTTTGAACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKINGAELKDLDILDLEVAEKYEKAIKGIDGIAEKVQGMTIADSVRTQCNAIFKIFNDLFGEGTDKKIFGNKVNLLTCLQ
AFDELITQTNASRAEVEKIANKYSPNRAARRKKK

Sequences:

>Translated_114_residues
MKINGAELKDLDILDLEVAEKYEKAIKGIDGIAEKVQGMTIADSVRTQCNAIFKIFNDLFGEGTDKKIFGNKVNLLTCLQ
AFDELITQTNASRAEVEKIANKYSPNRAARRKKK
>Mature_114_residues
MKINGAELKDLDILDLEVAEKYEKAIKGIDGIAEKVQGMTIADSVRTQCNAIFKIFNDLFGEGTDKKIFGNKVNLLTCLQ
AFDELITQTNASRAEVEKIANKYSPNRAARRKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12737; Mature: 12737

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINGAELKDLDILDLEVAEKYEKAIKGIDGIAEKVQGMTIADSVRTQCNAIFKIFNDLF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GEGTDKKIFGNKVNLLTCLQAFDELITQTNASRAEVEKIANKYSPNRAARRKKK
CCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MKINGAELKDLDILDLEVAEKYEKAIKGIDGIAEKVQGMTIADSVRTQCNAIFKIFNDLF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
GEGTDKKIFGNKVNLLTCLQAFDELITQTNASRAEVEKIANKYSPNRAARRKKK
CCCCCCCHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA