| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755685
Identifier: 170755685
GI number: 170755685
Start: 2833191
End: 2833598
Strand: Reverse
Name: 170755685
Synonym: CLD_1914
Alternate gene names: NA
Gene position: 2833598-2833191 (Counterclockwise)
Preceding gene: 170754868
Following gene: 170755849
Centisome position: 71.59
GC content: 25.0
Gene sequence:
>408_bases ATGGATATGGAATTTATTGGAATGATTTTTAAAACTATCTTTGCCTTGGCTTTAGTGCTTTTACTTCTGTATTTGTCATT AAAGTTAGGAGGGGAAAAACTTCAAAAATTTCAAAATGGAAAATATATAAAAGTTTTAGAAAGGGTTCCATTGTCAAAGG AAAATTTTGTATGTGTAGTTAAAATAGGTGAAAAAGCCTATATTATGACTTCAACTCCTCATAGTATAGAAAAAGTAACA GAATTATCTAAAGATGACACAGAGAAAATAGAAAATTTAAAAGTTCAATCTATGCCACAGTATAATGATTTAAAGAAATT CCTAGAAAAAAAAGAACTAAATAAAATTTATGATAAACTTAAGTTAAATAAGCTAAAAAAGGAAGATAAATATGAAGAAA AGAAATAA
Upstream 100 bases:
>100_bases CTATTTTGATGATTTAATAGTACAATAGAAAATGTAAAAATAATATAAATTTTAGAAGCTTTTAAACAAAAGTGATTTTA AGTGTTGAAGGGACATAGTT
Downstream 100 bases:
>100_bases CAGAATGATGTTTATTGTTTTACTAGCTTTAGGTATAGTGTTTTTTTATTCCATGAAAGCCTATGCGGCACCACAAAATA CCATGCCTATACCTAAAATA
Product: flagellar biosynthesis domain-containing protein
Products: NA
Alternate protein names: Flagellar Biosynthetic Protein FliO
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MDMEFIGMIFKTIFALALVLLLLYLSLKLGGEKLQKFQNGKYIKVLERVPLSKENFVCVVKIGEKAYIMTSTPHSIEKVT ELSKDDTEKIENLKVQSMPQYNDLKKFLEKKELNKIYDKLKLNKLKKEDKYEEKK
Sequences:
>Translated_135_residues MDMEFIGMIFKTIFALALVLLLLYLSLKLGGEKLQKFQNGKYIKVLERVPLSKENFVCVVKIGEKAYIMTSTPHSIEKVT ELSKDDTEKIENLKVQSMPQYNDLKKFLEKKELNKIYDKLKLNKLKKEDKYEEKK >Mature_135_residues MDMEFIGMIFKTIFALALVLLLLYLSLKLGGEKLQKFQNGKYIKVLERVPLSKENFVCVVKIGEKAYIMTSTPHSIEKVT ELSKDDTEKIENLKVQSMPQYNDLKKFLEKKELNKIYDKLKLNKLKKEDKYEEKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15853; Mature: 15853
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00132 CARBOXYPEPT_ZN_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMEFIGMIFKTIFALALVLLLLYLSLKLGGEKLQKFQNGKYIKVLERVPLSKENFVCVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCCCCCCCEEEE KIGEKAYIMTSTPHSIEKVTELSKDDTEKIENLKVQSMPQYNDLKKFLEKKELNKIYDKL EECCEEEEEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLNKLKKEDKYEEKK HHHHHHHHHCCCCCC >Mature Secondary Structure MDMEFIGMIFKTIFALALVLLLLYLSLKLGGEKLQKFQNGKYIKVLERVPLSKENFVCVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHCCCCCCCCEEEE KIGEKAYIMTSTPHSIEKVTELSKDDTEKIENLKVQSMPQYNDLKKFLEKKELNKIYDKL EECCEEEEEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH KLNKLKKEDKYEEKK HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA