Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is fliL

Identifier: 170754868

GI number: 170754868

Start: 2833671

End: 2834192

Strand: Reverse

Name: fliL

Synonym: CLD_1913

Alternate gene names: 170754868

Gene position: 2834192-2833671 (Counterclockwise)

Preceding gene: 170756344

Following gene: 170755685

Centisome position: 71.6

GC content: 27.59

Gene sequence:

>522_bases
ATGAGCGAGAAAAATGTAGAGACAAAAGGTGGAAGTTTAAAAAAAATAATAATAATAGTTCTTGTGTTAGTTATAGTTGG
AGCAGGAGCTTTTGGAGGATATATGCTTTTTGCAAAGAATAAGAAAAATGCAAATAGTGCTAATCAAATGCCTGTAAATA
ATACTAATGTTATAAATTCACAGCAAACTAATGATGGAATGTATCCACAACAGGTAGTAGTTTCATCTAAAACTTACTCT
TTAGATGAATTTTTAGTTAATTTAGCAGATGAAGATGGAAAAAGATTTGTAAAAGCAAAGATTTTTATAGGTTATGAAGA
AAAAAAATTAGCTAAAGAATTAGAAAAAAAGAAACCTATATTAAGGGATGCGGTTATAGGGGTTTTAAGATCTAAAAAAG
CTGCAGATATAAACCCTAAAAATATCGACAAAATAAAAGTAGAAATTATAAATAAAATTAGTCCTATGCTCGAAAAAGGC
AGAATTAGCAGTATCTATTTTGATGATTTAATAGTACAATAG

Upstream 100 bases:

>100_bases
AATATAGACCAATAGCACAAAATAATTCCGATGCCAACAAAGCAAAGAATAGAAGGGTAAATATAGTTATAGTTTCAAAA
GAAAAGGAGAGTAGCAAAAA

Downstream 100 bases:

>100_bases
AAAATGTAAAAATAATATAAATTTTAGAAGCTTTTAAACAAAAGTGATTTTAAGTGTTGAAGGGACATAGTTATGGATAT
GGAATTTATTGGAATGATTT

Product: flagellar basal body-associated protein FliL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSEKNVETKGGSLKKIIIIVLVLVIVGAGAFGGYMLFAKNKKNANSANQMPVNNTNVINSQQTNDGMYPQQVVVSSKTYS
LDEFLVNLADEDGKRFVKAKIFIGYEEKKLAKELEKKKPILRDAVIGVLRSKKAADINPKNIDKIKVEIINKISPMLEKG
RISSIYFDDLIVQ

Sequences:

>Translated_173_residues
MSEKNVETKGGSLKKIIIIVLVLVIVGAGAFGGYMLFAKNKKNANSANQMPVNNTNVINSQQTNDGMYPQQVVVSSKTYS
LDEFLVNLADEDGKRFVKAKIFIGYEEKKLAKELEKKKPILRDAVIGVLRSKKAADINPKNIDKIKVEIINKISPMLEKG
RISSIYFDDLIVQ
>Mature_172_residues
SEKNVETKGGSLKKIIIIVLVLVIVGAGAFGGYMLFAKNKKNANSANQMPVNNTNVINSQQTNDGMYPQQVVVSSKTYSL
DEFLVNLADEDGKRFVKAKIFIGYEEKKLAKELEKKKPILRDAVIGVLRSKKAADINPKNIDKIKVEIINKISPMLEKGR
ISSIYFDDLIVQ

Specific function: Controls the rotational direction of flagella during chemotaxis [H]

COG id: COG1580

COG function: function code N; Flagellar basal body-associated protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005503 [H]

Pfam domain/function: PF03748 FliL [H]

EC number: NA

Molecular weight: Translated: 19232; Mature: 19101

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKNVETKGGSLKKIIIIVLVLVIVGAGAFGGYMLFAKNKKNANSANQMPVNNTNVINS
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
QQTNDGMYPQQVVVSSKTYSLDEFLVNLADEDGKRFVKAKIFIGYEEKKLAKELEKKKPI
CCCCCCCCCHHEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCH
LRDAVIGVLRSKKAADINPKNIDKIKVEIINKISPMLEKGRISSIYFDDLIVQ
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCC
>Mature Secondary Structure 
SEKNVETKGGSLKKIIIIVLVLVIVGAGAFGGYMLFAKNKKNANSANQMPVNNTNVINS
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCC
QQTNDGMYPQQVVVSSKTYSLDEFLVNLADEDGKRFVKAKIFIGYEEKKLAKELEKKKPI
CCCCCCCCCHHEEECCCCCCHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHCCCH
LRDAVIGVLRSKKAADINPKNIDKIKVEIINKISPMLEKGRISSIYFDDLIVQ
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]