| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is murQ
Identifier: 170755643
GI number: 170755643
Start: 1506105
End: 1507013
Strand: Direct
Name: murQ
Synonym: CLD_3192
Alternate gene names: 170755643
Gene position: 1506105-1507013 (Clockwise)
Preceding gene: 170757416
Following gene: 170756930
Centisome position: 38.05
GC content: 32.45
Gene sequence:
>909_bases ATGACCAATATTAGTTTAGATAAATTAGTAACTGAGAGTAGAAATGAAAATACTAAAGATATAGATAGAGTTGAAACTTT AGAGATGTTAAAGATGATAAATGATGAAGATAAAAAGGTTGCAGAAGCTGTAGAAAAAGAGCTTATTAATATAGCAAAGG CTGTTGATAAAATAGGAGAATCATTTTTAAATGGGGGTAGACTTATATATGTAGGAGCTGGTACATCAGGAAGATTAGGA GTATTAGATGCATCAGAGTGTCCACCAACATATGGGGTGAGTTATGATTTGGTAAGAGGGATTATAGCAGGAGGAGAATC GGCTATGTTTAAAGCTAGGGAAGGAGCAGAGGATTCTAAAAAACTTTGTATTAAAGATTTGAAAAATGTTAATTTTGGTG AAAATGATATATTGGTTGGAATTGCAGCTAGTGGAAGAACTCCTTATGTTATAGGAGGATTAGAATATGCAAATGGGATA GGTGCTACAACAATTTCAGTTACGTGTAATCCAGAATCAGAAATGTCTAAGATTGCAAATATTTCAATAGCACCAGTAGT AGGGCCAGAAGCTATAACAGGATCTACTAGAATGAAGGCAGGAACAGCTCAAAAAATGGTTCTAAACATGCTATCAACGG GTGCTATGGTTAAAACAGGCAAGGTTTATGGTAACTTGATGGTTGATTTAAAAGCTACTAATGAGAAATTGGTAGAAAGA GCTAAAAGAATTGTTATGCAGGCTACAGGATCTAAAAGAGAGCAGGTAGAAAAAATTCTTAAAGAAACAAATTTTGATGT TAAGTTGTCCATTTTTATGATAGAGAGTTCATTAGATAAAATAAAAGCTAAGGAAATATTAGACAAAAATAAAGGATATA TAGTAGAAGCAATAAAAGAAATAAGTTAA
Upstream 100 bases:
>100_bases TAAATAATATACTTGAAATTTTATTTCGTAAAGATATAATAAAGATAAAAGAAAAGGTTTTCAGATTCTTTGATATATAA CTTATGAGGAGGATTTAGGT
Downstream 100 bases:
>100_bases ACACAAAATAAATAGATAAAAATAGAATAATTATAGGGTGTAATTTAGAAATAAGATTATTGTTTAAATTTAAAACGTTC AGTTACATTTAAAAATAAAG
Product: N-acetylmuramic acid-6-phosphate etherase
Products: NA
Alternate protein names: MurNAc-6-P etherase; N-acetylmuramic acid 6-phosphate hydrolase; N-acetylmuramic acid 6-phosphate lyase [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MTNISLDKLVTESRNENTKDIDRVETLEMLKMINDEDKKVAEAVEKELINIAKAVDKIGESFLNGGRLIYVGAGTSGRLG VLDASECPPTYGVSYDLVRGIIAGGESAMFKAREGAEDSKKLCIKDLKNVNFGENDILVGIAASGRTPYVIGGLEYANGI GATTISVTCNPESEMSKIANISIAPVVGPEAITGSTRMKAGTAQKMVLNMLSTGAMVKTGKVYGNLMVDLKATNEKLVER AKRIVMQATGSKREQVEKILKETNFDVKLSIFMIESSLDKIKAKEILDKNKGYIVEAIKEIS
Sequences:
>Translated_302_residues MTNISLDKLVTESRNENTKDIDRVETLEMLKMINDEDKKVAEAVEKELINIAKAVDKIGESFLNGGRLIYVGAGTSGRLG VLDASECPPTYGVSYDLVRGIIAGGESAMFKAREGAEDSKKLCIKDLKNVNFGENDILVGIAASGRTPYVIGGLEYANGI GATTISVTCNPESEMSKIANISIAPVVGPEAITGSTRMKAGTAQKMVLNMLSTGAMVKTGKVYGNLMVDLKATNEKLVER AKRIVMQATGSKREQVEKILKETNFDVKLSIFMIESSLDKIKAKEILDKNKGYIVEAIKEIS >Mature_301_residues TNISLDKLVTESRNENTKDIDRVETLEMLKMINDEDKKVAEAVEKELINIAKAVDKIGESFLNGGRLIYVGAGTSGRLGV LDASECPPTYGVSYDLVRGIIAGGESAMFKAREGAEDSKKLCIKDLKNVNFGENDILVGIAASGRTPYVIGGLEYANGIG ATTISVTCNPESEMSKIANISIAPVVGPEAITGSTRMKAGTAQKMVLNMLSTGAMVKTGKVYGNLMVDLKATNEKLVERA KRIVMQATGSKREQVEKILKETNFDVKLSIFMIESSLDKIKAKEILDKNKGYIVEAIKEIS
Specific function: Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate [H]
COG id: COG2103
COG function: function code R; Predicted sugar phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788768, Length=291, Percent_Identity=57.0446735395189, Blast_Score=330, Evalue=5e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005486 - InterPro: IPR005488 - InterPro: IPR001347 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 32620; Mature: 32489
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS01272 GCKR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNISLDKLVTESRNENTKDIDRVETLEMLKMINDEDKKVAEAVEKELINIAKAVDKIGE CCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SFLNGGRLIYVGAGTSGRLGVLDASECPPTYGVSYDLVRGIIAGGESAMFKAREGAEDSK HHHCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHH KLCIKDLKNVNFGENDILVGIAASGRTPYVIGGLEYANGIGATTISVTCNPESEMSKIAN HHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECHHHCCCCCCEEEEEEECCHHHHHHHHC ISIAPVVGPEAITGSTRMKAGTAQKMVLNMLSTGAMVKTGKVYGNLMVDLKATNEKLVER CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECEEEEEEEEEEECCHHHHHHH AKRIVMQATGSKREQVEKILKETNFDVKLSIFMIESSLDKIKAKEILDKNKGYIVEAIKE HHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHCCCCHHHHHHHH IS CC >Mature Secondary Structure TNISLDKLVTESRNENTKDIDRVETLEMLKMINDEDKKVAEAVEKELINIAKAVDKIGE CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH SFLNGGRLIYVGAGTSGRLGVLDASECPPTYGVSYDLVRGIIAGGESAMFKAREGAEDSK HHHCCCEEEEEECCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCHHH KLCIKDLKNVNFGENDILVGIAASGRTPYVIGGLEYANGIGATTISVTCNPESEMSKIAN HHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECHHHCCCCCCEEEEEEECCHHHHHHHHC ISIAPVVGPEAITGSTRMKAGTAQKMVLNMLSTGAMVKTGKVYGNLMVDLKATNEKLVER CEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECEEEEEEEEEEECCHHHHHHH AKRIVMQATGSKREQVEKILKETNFDVKLSIFMIESSLDKIKAKEILDKNKGYIVEAIKE HHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHCCCCHHHHHHHH IS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA