| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755601
Identifier: 170755601
GI number: 170755601
Start: 903500
End: 904141
Strand: Direct
Name: 170755601
Synonym: CLD_3778
Alternate gene names: NA
Gene position: 903500-904141 (Clockwise)
Preceding gene: 170755348
Following gene: 170755030
Centisome position: 22.83
GC content: 30.06
Gene sequence:
>642_bases TTGGATAAAAATATTTTAGAGGTAAAAAAGCAAAGGATAATGAGAACTATAGAATCCTTACAAGAAAATAATATGAATGG ATATTTAGTTAAAGATAAGGATGAATTAATAGATAAAATAAAAGAAATAGTAAAAGAAGGATCTAAGGTTTCTTGCGGGG GTTCTATGACTTTATTTGAAACAGGAGTTATAGATCATTTAAGATCTGGAAGATATGAATTTTTAGATAGATATGAAGAA GGCTTAACTCCACAGGACATAAAGAATATATTCAGAGAATCATTTTTTGCAGATGCCTATTTTGCAAGTTCCAATGCTAT AACCGAAAAGGGAGAATTATATAATGTAGATGGAAATGGAAATAGAGTTGCAGCTATGCTTTATGGACCAGATAAGGTTA TTGTTATAGCCGGAGTAAATAAAATAGTGAGAGACTTAGATGAAGCCATAAAAAGAAACGTATATGTATCAGCACCAGCT AATACTAAAAGATTGCAAAGAAAAACTCCTTGCACAAAGCTAGGATATTGCATGGACTGCAAAAGTGAGGAGAGAATATG TAATGAGTATACATTGATAAAGAGACAAGGAAATAAAGATAGAATTCATGTAATATTTATAAATGAAGATTTTGGATACT AA
Upstream 100 bases:
>100_bases TTAGAATTTGATAAAATATAGTTAGTAGGAAAATTAAAAAAATTTTAGGTATGATTTTTAAGAAAATAAAAAAATTAACT AAGTATGGGAGGGTATGATT
Downstream 100 bases:
>100_bases AATTTCTTGAGCTGAAAAGATTTTATCCCATGAATACCCGCTCTAATGCTCTCATCTTTTTAAAAGTGGGAATAAAGAGC GGATATGTCATTGGATAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MDKNILEVKKQRIMRTIESLQENNMNGYLVKDKDELIDKIKEIVKEGSKVSCGGSMTLFETGVIDHLRSGRYEFLDRYEE GLTPQDIKNIFRESFFADAYFASSNAITEKGELYNVDGNGNRVAAMLYGPDKVIVIAGVNKIVRDLDEAIKRNVYVSAPA NTKRLQRKTPCTKLGYCMDCKSEERICNEYTLIKRQGNKDRIHVIFINEDFGY
Sequences:
>Translated_213_residues MDKNILEVKKQRIMRTIESLQENNMNGYLVKDKDELIDKIKEIVKEGSKVSCGGSMTLFETGVIDHLRSGRYEFLDRYEE GLTPQDIKNIFRESFFADAYFASSNAITEKGELYNVDGNGNRVAAMLYGPDKVIVIAGVNKIVRDLDEAIKRNVYVSAPA NTKRLQRKTPCTKLGYCMDCKSEERICNEYTLIKRQGNKDRIHVIFINEDFGY >Mature_213_residues MDKNILEVKKQRIMRTIESLQENNMNGYLVKDKDELIDKIKEIVKEGSKVSCGGSMTLFETGVIDHLRSGRYEFLDRYEE GLTPQDIKNIFRESFFADAYFASSNAITEKGELYNVDGNGNRVAAMLYGPDKVIVIAGVNKIVRDLDEAIKRNVYVSAPA NTKRLQRKTPCTKLGYCMDCKSEERICNEYTLIKRQGNKDRIHVIFINEDFGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24415; Mature: 24415
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNILEVKKQRIMRTIESLQENNMNGYLVKDKDELIDKIKEIVKEGSKVSCGGSMTLFE CCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCEECCCCCEEHHH TGVIDHLRSGRYEFLDRYEEGLTPQDIKNIFRESFFADAYFASSNAITEKGELYNVDGNG HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC NRVAAMLYGPDKVIVIAGVNKIVRDLDEAIKRNVYVSAPANTKRLQRKTPCTKLGYCMDC CEEEEEEECCCEEEEEECHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCCCCCCCEECC KSEERICNEYTLIKRQGNKDRIHVIFINEDFGY CCHHHHHHHHHHEEECCCCCEEEEEEEECCCCC >Mature Secondary Structure MDKNILEVKKQRIMRTIESLQENNMNGYLVKDKDELIDKIKEIVKEGSKVSCGGSMTLFE CCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHCCCEECCCCCEEHHH TGVIDHLRSGRYEFLDRYEEGLTPQDIKNIFRESFFADAYFASSNAITEKGELYNVDGNG HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC NRVAAMLYGPDKVIVIAGVNKIVRDLDEAIKRNVYVSAPANTKRLQRKTPCTKLGYCMDC CEEEEEEECCCEEEEEECHHHHHHHHHHHHHCCEEEECCCCHHHHHHCCCCCCCCCEECC KSEERICNEYTLIKRQGNKDRIHVIFINEDFGY CCHHHHHHHHHHEEECCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA