| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755495
Identifier: 170755495
GI number: 170755495
Start: 2181947
End: 2182879
Strand: Reverse
Name: 170755495
Synonym: CLD_2592
Alternate gene names: NA
Gene position: 2182879-2181947 (Counterclockwise)
Preceding gene: 170757450
Following gene: 170756280
Centisome position: 55.15
GC content: 23.58
Gene sequence:
>933_bases ATGATATTGAGTGTAAGTAGAAGGACCGATATACCAGCTTTTTATAGTGAGTGGTTTTTTAATAGAATAAAGGAAGGGTT CGCGTTAGTAAGAAATCCCTTTAATGCAAAGCAAATTAGTAGAATAAATTTAAGTCCAAAGGTAATAGATTGTATAGTAT TTTGGACTAAGAATCCTAAAAAAATGATAAAGAGATTGGAAGAAATCAAAGAATATAATTATTACTTTCAATTTACTTTA AACTCATATGATAAAACTTTAGAAAAAAATGTTCCTGAGAAGAAATATTTAATAAATACATTTATAGAATTATCACAAAA AATTGGTAAAGACAAAGTAATATGGAGGTATGATCCTATAATATTAACTGATAAATTTACAAAAGAATATCATTATAAAT GGTTTGAGTACCTTGCAAAAAGATTAAGTCCATATACAAATAAATGTGTTATTAGTTTTTTAGATTTATACAAAAAAACT GAACGTAATTTAAAGAAAATAAATATTTTACAATTAAACAAAGATGATATGATTCATTTAGCTGATAAGTTTTCAAAAAT AGCTTCTAAATATAATTTAATTATTGAAACTTGTTCAGAAGAAATAGAACTATCTAAGTTTAATATTAATCATGGGAAGT GTATAGATGATAAATTGATTTCTCATATTACTGGTAAAAAATTATATATAGATAAGGATACAAACCAAAGAGAAATTTGT GGATGTGTAAAAAGTATTGATATAGGGGCTTATAATACATGTAATCATGACTGTTTGTATTGTTACGCTAATTTTAATAG AGAAGTTGTTAAAAAAAATCTGTTAAGACATAATAAAAAATCACCACTATTATTTGGTGACTTATATGGAGATGAACAAA TTATAGATAGAAAAATGAAATCATATATAGTAGGTCAAATTTCTTTTTTATAA
Upstream 100 bases:
>100_bases TTGATAAAGAAGTTAATTGAATAATCTATTCGTATTAGCCAACTTAAGATAGCCTGATGTATTTGATTCATTTATTTTAT AGAAAAGGAGATAGAAATAA
Downstream 100 bases:
>100_bases AAAATATTATATTTTTTTATATTATTTTTAAGATTATATTGACAGCATTAGAATAGTATGATACTATAACATAAACTTAC CAAGAGGAGGATTATTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPKKMIKRLEEIKEYNYYFQFTL NSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPIILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKT ERNLKKINILQLNKDDMIHLADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMKSYIVGQISFL
Sequences:
>Translated_310_residues MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPKKMIKRLEEIKEYNYYFQFTL NSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPIILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKT ERNLKKINILQLNKDDMIHLADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMKSYIVGQISFL >Mature_310_residues MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPKKMIKRLEEIKEYNYYFQFTL NSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPIILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKT ERNLKKINILQLNKDDMIHLADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMKSYIVGQISFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36919; Mature: 36919
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPK CEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCHHEEEEEEEECCCHH KMIKRLEEIKEYNYYFQFTLNSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPI HHHHHHHHHHHCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCE ILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKTERNLKKINILQLNKDDMIHL EEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCHHHH ADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCHHHHH GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMK HHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH SYIVGQISFL HHHHHHEECC >Mature Secondary Structure MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPK CEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCHHEEEEEEEECCCHH KMIKRLEEIKEYNYYFQFTLNSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPI HHHHHHHHHHHCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCE ILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKTERNLKKINILQLNKDDMIHL EEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCHHHH ADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCHHHHH GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMK HHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH SYIVGQISFL HHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA