Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755495

Identifier: 170755495

GI number: 170755495

Start: 2181947

End: 2182879

Strand: Reverse

Name: 170755495

Synonym: CLD_2592

Alternate gene names: NA

Gene position: 2182879-2181947 (Counterclockwise)

Preceding gene: 170757450

Following gene: 170756280

Centisome position: 55.15

GC content: 23.58

Gene sequence:

>933_bases
ATGATATTGAGTGTAAGTAGAAGGACCGATATACCAGCTTTTTATAGTGAGTGGTTTTTTAATAGAATAAAGGAAGGGTT
CGCGTTAGTAAGAAATCCCTTTAATGCAAAGCAAATTAGTAGAATAAATTTAAGTCCAAAGGTAATAGATTGTATAGTAT
TTTGGACTAAGAATCCTAAAAAAATGATAAAGAGATTGGAAGAAATCAAAGAATATAATTATTACTTTCAATTTACTTTA
AACTCATATGATAAAACTTTAGAAAAAAATGTTCCTGAGAAGAAATATTTAATAAATACATTTATAGAATTATCACAAAA
AATTGGTAAAGACAAAGTAATATGGAGGTATGATCCTATAATATTAACTGATAAATTTACAAAAGAATATCATTATAAAT
GGTTTGAGTACCTTGCAAAAAGATTAAGTCCATATACAAATAAATGTGTTATTAGTTTTTTAGATTTATACAAAAAAACT
GAACGTAATTTAAAGAAAATAAATATTTTACAATTAAACAAAGATGATATGATTCATTTAGCTGATAAGTTTTCAAAAAT
AGCTTCTAAATATAATTTAATTATTGAAACTTGTTCAGAAGAAATAGAACTATCTAAGTTTAATATTAATCATGGGAAGT
GTATAGATGATAAATTGATTTCTCATATTACTGGTAAAAAATTATATATAGATAAGGATACAAACCAAAGAGAAATTTGT
GGATGTGTAAAAAGTATTGATATAGGGGCTTATAATACATGTAATCATGACTGTTTGTATTGTTACGCTAATTTTAATAG
AGAAGTTGTTAAAAAAAATCTGTTAAGACATAATAAAAAATCACCACTATTATTTGGTGACTTATATGGAGATGAACAAA
TTATAGATAGAAAAATGAAATCATATATAGTAGGTCAAATTTCTTTTTTATAA

Upstream 100 bases:

>100_bases
TTGATAAAGAAGTTAATTGAATAATCTATTCGTATTAGCCAACTTAAGATAGCCTGATGTATTTGATTCATTTATTTTAT
AGAAAAGGAGATAGAAATAA

Downstream 100 bases:

>100_bases
AAAATATTATATTTTTTTATATTATTTTTAAGATTATATTGACAGCATTAGAATAGTATGATACTATAACATAAACTTAC
CAAGAGGAGGATTATTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPKKMIKRLEEIKEYNYYFQFTL
NSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPIILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKT
ERNLKKINILQLNKDDMIHLADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC
GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMKSYIVGQISFL

Sequences:

>Translated_310_residues
MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPKKMIKRLEEIKEYNYYFQFTL
NSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPIILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKT
ERNLKKINILQLNKDDMIHLADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC
GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMKSYIVGQISFL
>Mature_310_residues
MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPKKMIKRLEEIKEYNYYFQFTL
NSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPIILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKT
ERNLKKINILQLNKDDMIHLADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC
GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMKSYIVGQISFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36919; Mature: 36919

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPK
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCHHEEEEEEEECCCHH
KMIKRLEEIKEYNYYFQFTLNSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPI
HHHHHHHHHHHCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCE
ILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKTERNLKKINILQLNKDDMIHL
EEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCHHHH
ADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCHHHHH
GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMK
HHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
SYIVGQISFL
HHHHHHEECC
>Mature Secondary Structure
MILSVSRRTDIPAFYSEWFFNRIKEGFALVRNPFNAKQISRINLSPKVIDCIVFWTKNPK
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCHHEEEEEEEECCCHH
KMIKRLEEIKEYNYYFQFTLNSYDKTLEKNVPEKKYLINTFIELSQKIGKDKVIWRYDPI
HHHHHHHHHHHCCEEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCE
ILTDKFTKEYHYKWFEYLAKRLSPYTNKCVISFLDLYKKTERNLKKINILQLNKDDMIHL
EEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCHHHH
ADKFSKIASKYNLIIETCSEEIELSKFNINHGKCIDDKLISHITGKKLYIDKDTNQREIC
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCHHHHH
GCVKSIDIGAYNTCNHDCLYCYANFNREVVKKNLLRHNKKSPLLFGDLYGDEQIIDRKMK
HHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHH
SYIVGQISFL
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA