Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755476

Identifier: 170755476

GI number: 170755476

Start: 138186

End: 139487

Strand: Direct

Name: 170755476

Synonym: CLD_0683

Alternate gene names: NA

Gene position: 138186-139487 (Clockwise)

Preceding gene: 170756927

Following gene: 170754234

Centisome position: 3.49

GC content: 29.11

Gene sequence:

>1302_bases
ATGAGAAAAATATTGTATTATGACTGTTTTTCGGGAATAAGTGGGGATATGAATTTAGGTGCTTTAATAGATTTAGGTGT
AGATAAGGAGTATCTATTAAAAGAATTAGCTAAGCTTAATATTAATGATGAATTTGAAATTAAAATAAATAAGGACTCTA
GAAAAGGTATATCAGGAACAAAAGTTGATGTTATATTAAAAAATTCATATGAGCATAGCCATGGACATGAACACAACCAT
GAATGTGAACATAGTCGTGGACATGAACATGAACACAACCATGAACATAGCCATGAGCATGAACATGGACATGGACATAA
TCATGCTCATAATCACAGAAATGTGATAAATATAAATAAAATAATAGATAACAGTAATCTAAATGATAATGTTAAAAAAA
TTAGCAAAGAAATATTTTTAGAGGTAGCAAAAGCTGAAGGAAAAGTGCATAATAAACCTTTAGAAGAGGTTCATTTTCAT
GAAGTTGGTGCAACAGATTCAATAGTAGATATAGTTGGGGCTGCTATATGTTTAGATTATTTAAAAGTAGATAAAGTATT
ATGTTCAAAGGTTCAAGTAGGATCTGGATTTGTAAAATGTGCCCATGGAACAATGCCAGTTCCAGCACCAGCTACAGCAG
AGATATTAAGAGATATACCAATGATATCTTCAGAAGAAATACCTTTTGAAGCAACTACGCCTACAGGAGCAGCTATAGTA
GCTTCTACAGTATATAAATTTACACAAAACAAAAATTTTCATATTGAAAAAGTTGGATATGGTATAGGTGGAAAAGATTT
ATCAGATATACCTAATGTATTAAGAGTTTTTTTAGCAGAAGTTAAAGAGCAGGAAGAAAATGATATTGAAAAAGAAGAAG
CTTTAATATTAGAATGCAATATAGATGATATGAATTCTGAAATTTATGAATATGTGATTAACAAACTACTTCATGAAGGA
GCATCAGATGCCTATATAACACCAATAATAATGAAGAAAACTAGACCTGCTGCTAAATTAACGGTTCTATGTGAAAATAA
ATTAGAAAATATTATGAGAGAAATTATGTTTAAAGAGACTACTACATTAGGAATAAGAAAATATTCTGTAGAGAAATCTA
TGCTAAAGAGAAAAATAGAAAAAGTAAAGACTATATATGGAGAGATTTCTGTAAAAAAATCTTATTTAAAAGGTCAGGTA
TTAAACAGTAAACCAGAATATGAGGATTGCAAAAAAATTGCATTAGAAAATAATATACCTATAAAAGAAGTTTATGAGGC
AGTTAATGAACGTAAGGAGTAA

Upstream 100 bases:

>100_bases
AATATATGTTAAAATTAATTATATATTTAGACAATTATTGTGAATAATATAAATTGATATTATACTTTATATAATAAATA
TAAAATAAGGAGAATGAAAT

Downstream 100 bases:

>100_bases
TATTATGAATATAAATGATAAATATAATAATCTTATTAATTATCTAAAAGATCTAAAAAGTGTGGCAGTAGCTTTTTCTG
GTGGTGTTGATAGTACATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGTKVDVILKNSYEHSHGHEHNH
ECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININKIIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFH
EVGATDSIVDIVGAAICLDYLKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV
ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECNIDDMNSEIYEYVINKLLHEG
ASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKETTTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQV
LNSKPEYEDCKKIALENNIPIKEVYEAVNERKE

Sequences:

>Translated_433_residues
MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGTKVDVILKNSYEHSHGHEHNH
ECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININKIIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFH
EVGATDSIVDIVGAAICLDYLKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV
ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECNIDDMNSEIYEYVINKLLHEG
ASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKETTTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQV
LNSKPEYEDCKKIALENNIPIKEVYEAVNERKE
>Mature_433_residues
MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGTKVDVILKNSYEHSHGHEHNH
ECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININKIIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFH
EVGATDSIVDIVGAAICLDYLKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV
ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECNIDDMNSEIYEYVINKLLHEG
ASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKETTTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQV
LNSKPEYEDCKKIALENNIPIKEVYEAVNERKE

Specific function: Unknown

COG id: COG1641

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0272 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002822 [H]

Pfam domain/function: PF01969 DUF111 [H]

EC number: NA

Molecular weight: Translated: 49005; Mature: 49005

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGT
CCEEEEEEHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
KVDVILKNSYEHSHGHEHNHECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININK
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHH
IIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFHEVGATDSIVDIVGAAICLDY
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
LKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECN
HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
IDDMNSEIYEYVINKLLHEGASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKET
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHEEEEHHHHHHHHHHHHHHHHH
TTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQVLNSKPEYEDCKKIALENNIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
IKEVYEAVNERKE
HHHHHHHHHHCCC
>Mature Secondary Structure
MRKILYYDCFSGISGDMNLGALIDLGVDKEYLLKELAKLNINDEFEIKINKDSRKGISGT
CCEEEEEEHHCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
KVDVILKNSYEHSHGHEHNHECEHSRGHEHEHNHEHSHEHEHGHGHNHAHNHRNVININK
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHH
IIDNSNLNDNVKKISKEIFLEVAKAEGKVHNKPLEEVHFHEVGATDSIVDIVGAAICLDY
HHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
LKVDKVLCSKVQVGSGFVKCAHGTMPVPAPATAEILRDIPMISSEEIPFEATTPTGAAIV
HHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHH
ASTVYKFTQNKNFHIEKVGYGIGGKDLSDIPNVLRVFLAEVKEQEENDIEKEEALILECN
HHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
IDDMNSEIYEYVINKLLHEGASDAYITPIIMKKTRPAAKLTVLCENKLENIMREIMFKET
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHEEEEHHHHHHHHHHHHHHHHH
TTLGIRKYSVEKSMLKRKIEKVKTIYGEISVKKSYLKGQVLNSKPEYEDCKKIALENNIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
IKEVYEAVNERKE
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]