Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755426

Identifier: 170755426

GI number: 170755426

Start: 1046801

End: 1047643

Strand: Direct

Name: 170755426

Synonym: CLD_3633

Alternate gene names: NA

Gene position: 1046801-1047643 (Clockwise)

Preceding gene: 170754657

Following gene: 170756094

Centisome position: 26.45

GC content: 28.83

Gene sequence:

>843_bases
ATGAAAAATGAAATAACAACATTCAAAGCAATAAGTGCTATATTTGGGGGAATTCTTGTTTTGGTAATCTGCCAATCGCT
AAGCCATCTAGCTTATATACTTCCATTGCCTAAGGTAATTACGAGTATGTTTTTTGGAATAACTTATGTACTACTTTCTT
ATCTTTTTCTATCAAATCTATGTGAAAAATTTTTTTGTCATAGTTTATTAGAATGTGGTATTGGAAAGCCAAAGATTAAT
TTTACATGGCTAGTAATTGGAATAATTTTACCAGTGGTGGTATCTGTATTATTAATTCTTACTCCAGGATATTTTGTTAA
TAATGGAAAATCAACAACTGAAATAATAAGTAAAATTATAATTTCTATTTTTACTGTAGGTTGTGCTGCAGTTGTTGAAG
AAATGATTTTTAGAGGGTTTATTATGTATATATTGAAACAGCGATGGGGTAAGATGATATCTATATTTGTACCATCAATT
GTTTTTGGATTACTTCATACAATGGGAGGAATGAATTTTAGTGATATTTTAATGCTATTTATCGCTGGGACAAGTGTTGG
TATAATGTTTTCACTTATCACTTATGAAAGTAAAACAATCTGGTCAAGTGCTATAGTACATGCTATTTGGAATATCATTA
TTATTGGAGGCATATTAGACATAGGTGTCAAGCATAATGCTGAATGCATTTATTCATATGTTCTCAATTCAAAATCAATA
TTTTTAACTGGGGGACAATTCGGAATAGAAGCATCAGTAATTTCTATAATTGGATATATTGCAGTAATTAGTTTTACGAT
ATCTAGAGTTTATAAAAAGAAAGATATTGCCATAGGTATTTAA

Upstream 100 bases:

>100_bases
ATATATGGAAAATATGGTATAATTTTAGTGTTGGTAAATCGTAGTTATATTTTATGTTTGAATGATGATATTTTTATTAG
GTCAGGAGGAAATATAGAGA

Downstream 100 bases:

>100_bases
GTAATGATTGAAAAAATGAACAATTTACTAAGACATCGCACTATTCAAATATGAATTTTGGGGTGTTTTTCTTTATAGAA
ATTAAAATATAATACGAAAC

Product: CAAX amino terminal protease family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNLCEKFFCHSLLECGIGKPKIN
FTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI
VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI

Sequences:

>Translated_280_residues
MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNLCEKFFCHSLLECGIGKPKIN
FTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI
VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI
>Mature_280_residues
MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNLCEKFFCHSLLECGIGKPKIN
FTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKIIISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSI
VFGLLHTMGGMNFSDILMLFIAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI

Specific function: Unknown

COG id: COG1266

COG function: function code R; Predicted metal-dependent membrane protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30855; Mature: 30855

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CEKFFCHSLLECGIGKPKINFTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKII
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
ISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSIVFGLLHTMGGMNFSDILMLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE
FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNEITTFKAISAIFGGILVLVICQSLSHLAYILPLPKVITSMFFGITYVLLSYLFLSNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CEKFFCHSLLECGIGKPKINFTWLVIGIILPVVVSVLLILTPGYFVNNGKSTTEIISKII
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHH
ISIFTVGCAAVVEEMIFRGFIMYILKQRWGKMISIFVPSIVFGLLHTMGGMNFSDILMLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IAGTSVGIMFSLITYESKTIWSSAIVHAIWNIIIIGGILDIGVKHNAECIYSYVLNSKSI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEE
FLTGGQFGIEASVISIIGYIAVISFTISRVYKKKDIAIGI
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA