| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755361
Identifier: 170755361
GI number: 170755361
Start: 578340
End: 578780
Strand: Direct
Name: 170755361
Synonym: CLD_0282
Alternate gene names: NA
Gene position: 578340-578780 (Clockwise)
Preceding gene: 170754609
Following gene: 170755894
Centisome position: 14.61
GC content: 31.75
Gene sequence:
>441_bases GTGATAAAACAAATTATATTAGCATTTTTTGGAAGTGTGTTTCCTGTTATACTCTTTAATATTGATAGAAAAAAAATAAT ATGGACTGGTTTTGCAGGTTCTATTGGTTGGACGGCATATCTTATAGTATATAATTATATATATAGCCCTGTTATGGCAT CCTTTGTTGGGGCTTTTATGGTAGGAATATATAGTGAAGTTATGGCAAGAAAGCTTAAAACACCTGCTATGCAGTTTTCT ATACCAGGTATATTTCCATTAGTACCAGGAATTACTGCTTATTATGCCATAAATTCTATAGTTGAACAAAATTATGCTTT AGCCTATTCTAAGGGATTTCAAACTGTAGCCGTAGGTGGAGCAATTGCTTTTGGCATAATGCTTTCTTCAACTACTGTTA GGTTTATTACAAAAATAACTCAAACTAGAGATGCAAAATAA
Upstream 100 bases:
>100_bases TTATGTCTGGTATAGTAAAGTTTGGAGAGGCAATGCTAGTGGTAACTGCCATGGGAGCAGGAATTGCTACAGCATTGACA TTGGGAGTAGGTGTTAAGTG
Downstream 100 bases:
>100_bases AATATATTTAATTTTAATTTCACAAATATAAAAATTACCTTATAAATCAACTCATTTCACTAAGAAGTTCTAAACTTGGC TCCATTAAAAATTTTTTACC
Product: hypothetical protein
Products: NA
Alternate protein names: Threonine/Serine Exporter; Integral Membrane Protein
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFMVGIYSEVMARKLKTPAMQFS IPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGGAIAFGIMLSSTTVRFITKITQTRDAK
Sequences:
>Translated_146_residues MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFMVGIYSEVMARKLKTPAMQFS IPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGGAIAFGIMLSSTTVRFITKITQTRDAK >Mature_146_residues MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFMVGIYSEVMARKLKTPAMQFS IPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGGAIAFGIMLSSTTVRFITKITQTRDAK
Specific function: Unknown
COG id: COG3610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16108; Mature: 16108
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFM CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGIYSEVMARKLKTPAMQFSIPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGG HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIAFGIMLSSTTVRFITKITQTRDAK HHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKQIILAFFGSVFPVILFNIDRKKIIWTGFAGSIGWTAYLIVYNYIYSPVMASFVGAFM CHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGIYSEVMARKLKTPAMQFSIPGIFPLVPGITAYYAINSIVEQNYALAYSKGFQTVAVGG HHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH AIAFGIMLSSTTVRFITKITQTRDAK HHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA