| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755357
Identifier: 170755357
GI number: 170755357
Start: 2024687
End: 2025376
Strand: Reverse
Name: 170755357
Synonym: CLD_2735
Alternate gene names: NA
Gene position: 2025376-2024687 (Counterclockwise)
Preceding gene: 170756140
Following gene: 170755207
Centisome position: 51.17
GC content: 20.29
Gene sequence:
>690_bases ATGGATAAAAGCAATATATGCTTAAAGGACATGAAATTTAATAGCTTAAAAGAAAAAAGTGTTATAGAGAATAATATAAT AAAAATAGTTAGTATGGAAAAGAGAAAATTGTATTTAATACTAGAAGGAGAGAGAGTATACGCTAAATTTATAACATTGC CTAGAATAAATAGCAGGAATAAAATAAATGAATTAATAAGAAATGAATTGATATATGAATTTAATAATATAGACAATATA TTATATAGTTATGATATTTTAAGGAAGAATAAAACTAGTATGGAAGGTATAATTTTTTGTATAAATATAGGAAATAATAA AATATTAAAAAAATGCATGGCGCAGTGCAAAAATATAGCAGGTATATATTCTATACAATTCTCTGTATTAAATTTATACA AGGAATATATAAAGGAAAAAAATTATATTTTTTTATTTAAGCATAAAAAGTACACTTACATAATACTTTATTCAGAAAAT AATTTAATTTATAGTAATTTTATTTATGAAGGGGAAAAAGAAGAGCACAAAATAGAAAAAGTTCTAAAAAAAGCTGAGGA TCTAAATATAACCCTAAATACCATATATGGAATAAATATAGATAATGATTCTATAAAAGATAAGCTAAAAGAATATAATT TTGTATCTTTACAAAAATTTAGAGAAAAAGACTATAAAAAAATAATATAG
Upstream 100 bases:
>100_bases AATTTCTGCTAAGGATTCTAATATAGCTTATAAAAGGGAGTATGTATCCTATGAAAGGAAAGTGAGTAATTAATTGTTTA AAAATATTAACTTGTTGGAG
Downstream 100 bases:
>100_bases TGGGAGAAAAAGAAAGTGAAAATTAATTTTATACCAGAAAGTTATATAGAAATGAACCATAAAAAATCTATAAAAAACCA TATTATATTAATAATTATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRNKINELIRNELIYEFNNIDNI LYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIAGIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSEN NLIYSNFIYEGEKEEHKIEKVLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII
Sequences:
>Translated_229_residues MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRNKINELIRNELIYEFNNIDNI LYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIAGIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSEN NLIYSNFIYEGEKEEHKIEKVLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII >Mature_229_residues MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRNKINELIRNELIYEFNNIDNI LYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIAGIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSEN NLIYSNFIYEGEKEEHKIEKVLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27434; Mature: 27434
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRN CCCCCEEEECCCCCCCHHHHHHHCCEEEEEEECCCEEEEEEECCEEEEEEEECCCCCCHH KINELIRNELIYEFNNIDNILYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIA HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCC GIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSENNLIYSNFIYEGEKEEHKIEK HHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCEEEEEEEECCCCHHHHHHH VLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII HHHHHCCCEEEEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MDKSNICLKDMKFNSLKEKSVIENNIIKIVSMEKRKLYLILEGERVYAKFITLPRINSRN CCCCCEEEECCCCCCCHHHHHHHCCEEEEEEECCCEEEEEEECCEEEEEEEECCCCCCHH KINELIRNELIYEFNNIDNILYSYDILRKNKTSMEGIIFCINIGNNKILKKCMAQCKNIA HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCC GIYSIQFSVLNLYKEYIKEKNYIFLFKHKKYTYIILYSENNLIYSNFIYEGEKEEHKIEK HHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEECCCCEEEEEEEECCCCHHHHHHH VLKKAEDLNITLNTIYGINIDNDSIKDKLKEYNFVSLQKFREKDYKKII HHHHHCCCEEEEEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA