| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170755325
Identifier: 170755325
GI number: 170755325
Start: 3281503
End: 3282525
Strand: Reverse
Name: 170755325
Synonym: CLD_1512
Alternate gene names: NA
Gene position: 3282525-3281503 (Counterclockwise)
Preceding gene: 170754256
Following gene: 170754296
Centisome position: 82.93
GC content: 30.11
Gene sequence:
>1023_bases ATGATTGTATCAATAGCTGGAATTGCTAAAACATTTACGGTACTTAGCAAATTAGTAGGTACTATAAATAATGTGATAGG TATATTTGGTAAATTAAAGAAAGCTGGAGGGATATTTGGATTATTAAAGACCATAATAACTTCAAAAACACTTCTAATTT TAGTTGCTATTGCAGCAATAGGACTTATAGTATATGAAGTAATTAAGCATTGGGATAAACTAAAAGCATACTTTATTAAA TTTTGGAATGGTACAAAAAAAGTTTTTCATAACTTTTGGTCATGGCTTCAAGAATTCTTTAAAAAATGGGGCCCTATAAT ATTAGCAATATTAGCTCCTTTTTTAGGTATTCCACTGTTAATTATACAAAATTGGGATAGAATAAAGTCAGCATTTTCAG CAATACTTGTACACATTACCAATGTAGGTAAAAAGATTGGGAAATTTTTCGAAGAGTCTGCACAAGGATGGAAAATGCTA GGAGAAGATATTGTGGGATATGTAAAGAAACTAGGGCACAGAATTATTGACGGATTTGTTAATGGTATAGAAAAAAGGGT TAAGAGAGTAAAGGATGCAGCAACTAATTTGGCCAATACTGTAAAAAGTGGATTTAAGAATCCATTAAAAATACATTCTC CTAGTAGAGTGTTCGATGAGTATGGTAGATTTATTGGAGAAGGACTTATACATGGTATAGATAATCAGGAAAGCGCCATA AATAATAAATTTAAAGGTATAGCTAATAAAATTAAAGGATTAGGAAATGTAAGACCAAATTTTAATGGATTAAATAATAT GTCACTTAGTGGAGCATATGGTGGTACTTATGCATCTCCATATGGACCTAATAACATGAATAAAAGTATGGGACTTACAC AGGATATAAAAATGTATGTAACTATACCAAATGCAGATAAAGAAGGGGCTAATAAGATAGCTAATGAATTTAAACAAATG ACAGAAAGTTCTATGAAAAATGTTATGACAGGATTATTTATGAATGATGTATTGAGAGATTAG
Upstream 100 bases:
>100_bases ATAAATTAATTCCCGCTTTTACAAAAATAGCTAATAAGGCAATAGAACTAATGAATTCATTCAATAAATTACCAATCCAG TAAAAAACGCCATTGCAATA
Downstream 100 bases:
>100_bases GGGGTGGCTTATATGGACTTAAATAGAATAAAAGATTTTAAAGTAGATTTGCTTTATGAAGATAGAAAAAATACAGGTGG CGTAATAACTAACTATAAGC
Product: phage protein
Products: NA
Alternate protein names: Phage Tail Tape Measure Protein; Phage-Related Membrane Protein; Phage-Encoded Membrane Protein; Phage Minor Tail Protein; Gp29 Bacteriophage Membrane Protein; TMP Repeat Protein; Bacteriophage Tail Protein; Bacteriophage Membrane Protein; Phage Protein Tail Length Tape Measure Protein; Bacteriophage Tail Protein/Phage Tail Tape Measure Protein
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MIVSIAGIAKTFTVLSKLVGTINNVIGIFGKLKKAGGIFGLLKTIITSKTLLILVAIAAIGLIVYEVIKHWDKLKAYFIK FWNGTKKVFHNFWSWLQEFFKKWGPIILAILAPFLGIPLLIIQNWDRIKSAFSAILVHITNVGKKIGKFFEESAQGWKML GEDIVGYVKKLGHRIIDGFVNGIEKRVKRVKDAATNLANTVKSGFKNPLKIHSPSRVFDEYGRFIGEGLIHGIDNQESAI NNKFKGIANKIKGLGNVRPNFNGLNNMSLSGAYGGTYASPYGPNNMNKSMGLTQDIKMYVTIPNADKEGANKIANEFKQM TESSMKNVMTGLFMNDVLRD
Sequences:
>Translated_340_residues MIVSIAGIAKTFTVLSKLVGTINNVIGIFGKLKKAGGIFGLLKTIITSKTLLILVAIAAIGLIVYEVIKHWDKLKAYFIK FWNGTKKVFHNFWSWLQEFFKKWGPIILAILAPFLGIPLLIIQNWDRIKSAFSAILVHITNVGKKIGKFFEESAQGWKML GEDIVGYVKKLGHRIIDGFVNGIEKRVKRVKDAATNLANTVKSGFKNPLKIHSPSRVFDEYGRFIGEGLIHGIDNQESAI NNKFKGIANKIKGLGNVRPNFNGLNNMSLSGAYGGTYASPYGPNNMNKSMGLTQDIKMYVTIPNADKEGANKIANEFKQM TESSMKNVMTGLFMNDVLRD >Mature_340_residues MIVSIAGIAKTFTVLSKLVGTINNVIGIFGKLKKAGGIFGLLKTIITSKTLLILVAIAAIGLIVYEVIKHWDKLKAYFIK FWNGTKKVFHNFWSWLQEFFKKWGPIILAILAPFLGIPLLIIQNWDRIKSAFSAILVHITNVGKKIGKFFEESAQGWKML GEDIVGYVKKLGHRIIDGFVNGIEKRVKRVKDAATNLANTVKSGFKNPLKIHSPSRVFDEYGRFIGEGLIHGIDNQESAI NNKFKGIANKIKGLGNVRPNFNGLNNMSLSGAYGGTYASPYGPNNMNKSMGLTQDIKMYVTIPNADKEGANKIANEFKQM TESSMKNVMTGLFMNDVLRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37733; Mature: 37733
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSIAGIAKTFTVLSKLVGTINNVIGIFGKLKKAGGIFGLLKTIITSKTLLILVAIAAI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH GLIVYEVIKHWDKLKAYFIKFWNGTKKVFHNFWSWLQEFFKKWGPIILAILAPFLGIPLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IIQNWDRIKSAFSAILVHITNVGKKIGKFFEESAQGWKMLGEDIVGYVKKLGHRIIDGFV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGIEKRVKRVKDAATNLANTVKSGFKNPLKIHSPSRVFDEYGRFIGEGLIHGIDNQESAI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH NNKFKGIANKIKGLGNVRPNFNGLNNMSLSGAYGGTYASPYGPNNMNKSMGLTQDIKMYV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE TIPNADKEGANKIANEFKQMTESSMKNVMTGLFMNDVLRD EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIVSIAGIAKTFTVLSKLVGTINNVIGIFGKLKKAGGIFGLLKTIITSKTLLILVAIAAI CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH GLIVYEVIKHWDKLKAYFIKFWNGTKKVFHNFWSWLQEFFKKWGPIILAILAPFLGIPLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH IIQNWDRIKSAFSAILVHITNVGKKIGKFFEESAQGWKMLGEDIVGYVKKLGHRIIDGFV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NGIEKRVKRVKDAATNLANTVKSGFKNPLKIHSPSRVFDEYGRFIGEGLIHGIDNQESAI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH NNKFKGIANKIKGLGNVRPNFNGLNNMSLSGAYGGTYASPYGPNNMNKSMGLTQDIKMYV HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE TIPNADKEGANKIANEFKQMTESSMKNVMTGLFMNDVLRD EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA