Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755269

Identifier: 170755269

GI number: 170755269

Start: 1535601

End: 1536074

Strand: Direct

Name: 170755269

Synonym: CLD_3165

Alternate gene names: NA

Gene position: 1535601-1536074 (Clockwise)

Preceding gene: 170756296

Following gene: 170754496

Centisome position: 38.8

GC content: 30.8

Gene sequence:

>474_bases
ATGCCAAGACCAACAAAGTTTAGAAGAGTAGAATTTTTCCCAGAGAATAATTATTTTGTGCCCTGGGGGAAACCTAAATG
TGAAATACATGAGGTAGTATTAAAAGTTGAAGAATTAGAGGCTATGAGACTTAAGGATATAGAAGAATTAAATCAAGAAC
AATGTGCGGAAAAAATGGAAATATCTCGCCAAACCTTTCAAAATATAATAGATAGTGCTAGAAAAAAGGTAGCTATAGCT
TTAACAGAGGGAAATGCTATAAAAATAAGCGGAGGACATTATACTACGAAGCTTTGTAAACTAAAATGTATAGATTGTGA
AGAAATTTATGAAATAAATTATGAACAGGATAGACATCTATGTCCTAATTGTGGATCAGAGAAAGTAATATGTAACAAGA
AAGCTGATTTTTGTAGAAGATGGTGTAAAGGACAAAATAGGAAAGAACAATATGAGGAAAGTAAAAATAAATAA

Upstream 100 bases:

>100_bases
TAAAATTAAATAGATCTATAGAACATAGTAAAGACTTAGAAATTCGTGATGCTAATATATTATTTTTAGGGTTATGTAGT
AGATGCAAGGAGGAAGAAAA

Downstream 100 bases:

>100_bases
ATTATTAAATTAAGCACCATTTATAAATGGTGCTTAATTATGATGGCTGTTTTAGATTGTATAGTAATAAAATTTAGGTA
CTCACTTGTGAGATCATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPRPTKFRRVEFFPENNYFVPWGKPKCEIHEVVLKVEELEAMRLKDIEELNQEQCAEKMEISRQTFQNIIDSARKKVAIA
LTEGNAIKISGGHYTTKLCKLKCIDCEEIYEINYEQDRHLCPNCGSEKVICNKKADFCRRWCKGQNRKEQYEESKNK

Sequences:

>Translated_157_residues
MPRPTKFRRVEFFPENNYFVPWGKPKCEIHEVVLKVEELEAMRLKDIEELNQEQCAEKMEISRQTFQNIIDSARKKVAIA
LTEGNAIKISGGHYTTKLCKLKCIDCEEIYEINYEQDRHLCPNCGSEKVICNKKADFCRRWCKGQNRKEQYEESKNK
>Mature_156_residues
PRPTKFRRVEFFPENNYFVPWGKPKCEIHEVVLKVEELEAMRLKDIEELNQEQCAEKMEISRQTFQNIIDSARKKVAIAL
TEGNAIKISGGHYTTKLCKLKCIDCEEIYEINYEQDRHLCPNCGSEKVICNKKADFCRRWCKGQNRKEQYEESKNK

Specific function: Unknown

COG id: COG1342

COG function: function code R; Predicted DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0251 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002852 [H]

Pfam domain/function: PF02001 DUF134 [H]

EC number: NA

Molecular weight: Translated: 18569; Mature: 18437

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPTKFRRVEFFPENNYFVPWGKPKCEIHEVVLKVEELEAMRLKDIEELNQEQCAEKME
CCCCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRQTFQNIIDSARKKVAIALTEGNAIKISGGHYTTKLCKLKCIDCEEIYEINYEQDRHL
HHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCEEEHEEEEEECCHHHHHHCCCCCCCCC
CPNCGSEKVICNKKADFCRRWCKGQNRKEQYEESKNK
CCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PRPTKFRRVEFFPENNYFVPWGKPKCEIHEVVLKVEELEAMRLKDIEELNQEQCAEKME
CCCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISRQTFQNIIDSARKKVAIALTEGNAIKISGGHYTTKLCKLKCIDCEEIYEINYEQDRHL
HHHHHHHHHHHHHHHEEEEEEECCCEEEEECCCEEEHEEEEEECCHHHHHHCCCCCCCCC
CPNCGSEKVICNKKADFCRRWCKGQNRKEQYEESKNK
CCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA