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The map label for this gene is 170754496

Identifier: 170754496

GI number: 170754496

Start: 1536201

End: 1537472

Strand: Direct

Name: 170754496

Synonym: CLD_3164

Alternate gene names: NA

Gene position: 1536201-1537472 (Clockwise)

Preceding gene: 170755269

Following gene: 170757593

Centisome position: 38.81

GC content: 31.76

Gene sequence:

>1272_bases
ATGAGAATCTTAAAAAAAGGTGATAGAGGATCAGATGTTAGAAAGATTCAAGCAGTATTACAAAAGATAGGCTATAATGT
AGGGCCCATAGATGGAATATTTGGAAGTAATACAGAGGAAACAGTTAAAAGGTTTCAACTGAATAATGGGTTAGTTGTGG
ATGGCATTATAGGACCTAAGACTTATGAGGTATTGAATAAGTTTATACTAGGTTATAATACTTATACTATAAATCCTGGA
GATACTTTATATAATATAGCTAAAAGATACTATACTACTGTAGATAAAATAATGATTGCTAATCCTAATATAGACCCTAA
TAACCTTATTATAGGAAGTCAGATAATAGTTCCTATAGGCATTGATATAGTGGATACTAATGTTAACTATACTTATGAAA
TTATGGAAAAAGACATAATGGCTTTAAAAGAAAGATATCCTTTTATACAGGTAGGTGTTGCAGGAAAAAGTGTTTTAGGA
AAAAATTTATATTATATCAAATTAGGTGATGGGTCTAATGAAGTATTTTACAATGGAGCTCATCATGCATTAGAATGGAT
AACTGCATTATTGCTTATGAAATTTATTGAAGACTTTTCTAGAGCCTATAGTGAAGGCCGCAAAATAAAAGGATATAACA
TAAAAGATATTTGGAATAGAAGTAGTATTTATATAATGCCAATGGTAAATCCAGATGGGGTAGATTTAGTTATAAATGGA
CTTCAAAGGAATAATCCTTATTATGATGATTTAATAAAATGGAATAATGGCAGCACAGACTTTTCAAAAAATTGGCAAGC
TAACATAAAAGGAGTGGATTTAAATCATAATTATAATGCTTCTTGGTATGAGTCTAAAATTGCAGAAGAATCCTATGGTG
TGTATGGGCCAGGTCCTACTAGATATGGTGGGCCTTATCCCGAATCAGAACCTGAAAGTAGATCCGTTGCTGATTTTACA
AGGAATCATAACTTTAGATTAATATTAGCTTACCATAGTCAAGGGGAAGTAATATATTGGACTTATAGAGATATAATCCC
ACCGGGCGCAAGAAAAATTGGAGAATTATTTTCAAAAGTAAGTGGTTATGAGCTTTCAGAAACCGTTGGGATAGCCTCTT
ATGCAGGCTATAAGGACTGGTTCATAGCACAATTTAGAAGACCAGGTTTTACCATAGAAGTAGGAAAAGGGACGAATCCA
TTGCCTCTAAGTCAATTTGATAAAATATATAGAGACAATATAGAAATACTTTTATTGGCACCAATTGTTTAA

Upstream 100 bases:

>100_bases
ATGGTGCTTAATTATGATGGCTGTTTTAGATTGTATAGTAATAAAATTTAGGTACTCACTTGTGAGATCATAAAATCATA
TAATGCTATGAGGTGATTTT

Downstream 100 bases:

>100_bases
TTTGTAGTTGAGTTATTATTTATTAATTTATAGCTTATATATTCGTGCTAGGATTAGGATATAGTAATTAGGATTAGGAT
ATAGTAATACTGTTAGTATA

Product: zinc carboxypeptidase family protein

Products: NA

Alternate protein names: Endopeptidase I; Gamma-D-glutamyl-L-diamino acid endopeptidase I; Gamma-D-glutamyl-meso-diaminopimelate peptidase I [H]

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MRILKKGDRGSDVRKIQAVLQKIGYNVGPIDGIFGSNTEETVKRFQLNNGLVVDGIIGPKTYEVLNKFILGYNTYTINPG
DTLYNIAKRYYTTVDKIMIANPNIDPNNLIIGSQIIVPIGIDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLG
KNLYYIKLGDGSNEVFYNGAHHALEWITALLLMKFIEDFSRAYSEGRKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPTRYGGPYPESEPESRSVADFT
RNHNFRLILAYHSQGEVIYWTYRDIIPPGARKIGELFSKVSGYELSETVGIASYAGYKDWFIAQFRRPGFTIEVGKGTNP
LPLSQFDKIYRDNIEILLLAPIV

Sequences:

>Translated_423_residues
MRILKKGDRGSDVRKIQAVLQKIGYNVGPIDGIFGSNTEETVKRFQLNNGLVVDGIIGPKTYEVLNKFILGYNTYTINPG
DTLYNIAKRYYTTVDKIMIANPNIDPNNLIIGSQIIVPIGIDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLG
KNLYYIKLGDGSNEVFYNGAHHALEWITALLLMKFIEDFSRAYSEGRKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPTRYGGPYPESEPESRSVADFT
RNHNFRLILAYHSQGEVIYWTYRDIIPPGARKIGELFSKVSGYELSETVGIASYAGYKDWFIAQFRRPGFTIEVGKGTNP
LPLSQFDKIYRDNIEILLLAPIV
>Mature_423_residues
MRILKKGDRGSDVRKIQAVLQKIGYNVGPIDGIFGSNTEETVKRFQLNNGLVVDGIIGPKTYEVLNKFILGYNTYTINPG
DTLYNIAKRYYTTVDKIMIANPNIDPNNLIIGSQIIVPIGIDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLG
KNLYYIKLGDGSNEVFYNGAHHALEWITALLLMKFIEDFSRAYSEGRKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPTRYGGPYPESEPESRSVADFT
RNHNFRLILAYHSQGEVIYWTYRDIIPPGARKIGELFSKVSGYELSETVGIASYAGYKDWFIAQFRRPGFTIEVGKGTNP
LPLSQFDKIYRDNIEILLLAPIV

Specific function: An endopeptidase which hydrolyzes the gamma-D-Glu- (L)meso-diaminopimelic acid bond of L-Ala-gamma-D-Glu-(L)meso- diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. It is active on spore cortex peptidoglycan [H]

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 LysM repeats [H]

Homologues:

Organism=Homo sapiens, GI188536067, Length=203, Percent_Identity=27.0935960591133, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI221316749, Length=225, Percent_Identity=24, Blast_Score=70, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI25143424, Length=209, Percent_Identity=25.8373205741627, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71990304, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71990310, Length=196, Percent_Identity=29.5918367346939, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF00246 Peptidase_M14 [H]

EC number: =3.4.19.11 [H]

Molecular weight: Translated: 47999; Mature: 47999

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILKKGDRGSDVRKIQAVLQKIGYNVGPIDGIFGSNTEETVKRFQLNNGLVVDGIIGPK
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCH
TYEVLNKFILGYNTYTINPGDTLYNIAKRYYTTVDKIMIANPNIDPNNLIIGSQIIVPIG
HHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCEEEEEEC
IDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLGKNLYYIKLGDGSNEVFYNGA
EEEEECCCCEEEHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEEEEEECCCCCCEEECCH
HHALEWITALLLMKFIEDFSRAYSEGRKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCEEEEEECCCCCCEEEEEC
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPT
HHCCCCCHHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC
RYGGPYPESEPESRSVADFTRNHNFRLILAYHSQGEVIYWTYRDIIPPGARKIGELFSKV
CCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHH
SGYELSETVGIASYAGYKDWFIAQFRRPGFTIEVGKGTNPLPLSQFDKIYRDNIEILLLA
CCCCHHHHHCHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEEE
PIV
CCC
>Mature Secondary Structure
MRILKKGDRGSDVRKIQAVLQKIGYNVGPIDGIFGSNTEETVKRFQLNNGLVVDGIIGPK
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCH
TYEVLNKFILGYNTYTINPGDTLYNIAKRYYTTVDKIMIANPNIDPNNLIIGSQIIVPIG
HHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCEEEEEEC
IDIVDTNVNYTYEIMEKDIMALKERYPFIQVGVAGKSVLGKNLYYIKLGDGSNEVFYNGA
EEEEECCCCEEEHHHHHHHHHHHHCCCEEEEECCCCHHHCCCEEEEEECCCCCCEEECCH
HHALEWITALLLMKFIEDFSRAYSEGRKIKGYNIKDIWNRSSIYIMPMVNPDGVDLVING
HHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCEEEEEECCCCCCEEEEEC
LQRNNPYYDDLIKWNNGSTDFSKNWQANIKGVDLNHNYNASWYESKIAEESYGVYGPGPT
HHCCCCCHHHHEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCC
RYGGPYPESEPESRSVADFTRNHNFRLILAYHSQGEVIYWTYRDIIPPGARKIGELFSKV
CCCCCCCCCCCCCCCHHHHHCCCCEEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHH
SGYELSETVGIASYAGYKDWFIAQFRRPGFTIEVGKGTNPLPLSQFDKIYRDNIEILLLA
CCCCHHHHHCHHHHCCCCHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCCCEEEEEE
PIV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8503890; 3922755 [H]