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The map label for this gene is yfiH [C]

Identifier: 170755258

GI number: 170755258

Start: 2655918

End: 2656637

Strand: Reverse

Name: yfiH [C]

Synonym: CLD_2107

Alternate gene names: 170755258

Gene position: 2656637-2655918 (Counterclockwise)

Preceding gene: 170754467

Following gene: 170756077

Centisome position: 67.12

GC content: 25.14

Gene sequence:

>720_bases
ATGAATTTTGAAAAAATTAATGTAGGTGCATATACATTTCTAAAATCGGAATTTAAAAATGCTAATTTTATATTTTCTAC
TGGAGAAAATCATCTGAATTTTAATAAAAATATACATGAAGGAAAAGAAAATTTGAATAATATAAAAAAATGGTTTTTAT
TAGAGGAAGTATGTTATTTAGATCAAGTACACAGTAGTATAGTTAGAAATTTTAAGGATAAAGATAAAGAGGGAGATGCA
ATAATAACTAATAAATTTAATAGAGCTGTAGGTGTTTTTACAGCAGACTGTGTTCCTATATTGTTATATGATAAAGAAAA
TGAGGCAATAGGTGCGGTTCACAGTGGCTGGAGAGGTACCTATGAGAATATAGTCATAAATACTATAAAGAAAATGAAAG
AAAATTATAATACAAAAACAGAAAATATTATAGCTTCAATAGGTCCACATATAAAAGATTGTTGCTATGAAGTTAGTTAT
GAGTTAATAAATAAGTTTAAAGAAGACAAAATATATAATGATTATAATATAAACTATAAAAGAAATTTAAATATGGAAGC
ATGTATATTGGCACAACTAAGCAATGTAGGGGTTAAAAATGAAAATATAATTAGAGCAAACTTATGTACTATGTGTAGTT
CTGATCCTAAATTTTATTCCTATAGAAAAGAGGGGAATATAGGAAGACAATTTTCTTTTGTATATTTAAACAAACAGTAG

Upstream 100 bases:

>100_bases
AGTTAGAAACTCTATGTTAAAATAAAGTTAAAAAATATATATATTTGAAAAATAACATAAAATTAATGATAATATATTTA
TAGGAAGGATGATGTGTCTT

Downstream 100 bases:

>100_bases
GAGGGGTACCATGGCTATGGAAAAAATACTTATAGTAGACGATGAAGAACATATATGTGAATTAATAAAATTTAATTTAG
AAAATAATGGTTATAACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIHEGKENLNNIKKWFLLEEVCYLDQVHSSIVRNFKDKDKEGDA
IITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGTYENIVINTIKKMKENYNTKTENIIASIGPHIKDCCYEVSY
ELINKFKEDKIYNDYNINYKRNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ

Sequences:

>Translated_239_residues
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIHEGKENLNNIKKWFLLEEVCYLDQVHSSIVRNFKDKDKEGDA
IITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGTYENIVINTIKKMKENYNTKTENIIASIGPHIKDCCYEVSY
ELINKFKEDKIYNDYNINYKRNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ
>Mature_239_residues
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIHEGKENLNNIKKWFLLEEVCYLDQVHSSIVRNFKDKDKEGDA
IITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGTYENIVINTIKKMKENYNTKTENIIASIGPHIKDCCYEVSY
ELINKFKEDKIYNDYNINYKRNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=171, Percent_Identity=29.8245614035088, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI190194372, Length=171, Percent_Identity=29.8245614035088, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI1788945, Length=192, Percent_Identity=29.6875, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 27759; Mature: 27759

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIHEGKENLNNIKKWFLLEEVCYL
CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DQVHSSIVRNFKDKDKEGDAIITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGT
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCHHHHCCCCCH
YENIVINTIKKMKENYNTKTENIIASIGPHIKDCCYEVSYELINKFKEDKIYNDYNINYK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ
ECCCHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEECC
>Mature Secondary Structure
MNFEKINVGAYTFLKSEFKNANFIFSTGENHLNFNKNIHEGKENLNNIKKWFLLEEVCYL
CCCEEEECHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DQVHSSIVRNFKDKDKEGDAIITNKFNRAVGVFTADCVPILLYDKENEAIGAVHSGWRGT
HHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCHHHHCCCCCH
YENIVINTIKKMKENYNTKTENIIASIGPHIKDCCYEVSYELINKFKEDKIYNDYNINYK
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE
RNLNMEACILAQLSNVGVKNENIIRANLCTMCSSDPKFYSYRKEGNIGRQFSFVYLNKQ
ECCCHHHHHHHHHHHCCCCCCCEEEHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7961408; 11466286 [H]