Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755245

Identifier: 170755245

GI number: 170755245

Start: 3285554

End: 3285919

Strand: Reverse

Name: 170755245

Synonym: CLD_1505

Alternate gene names: NA

Gene position: 3285919-3285554 (Counterclockwise)

Preceding gene: 170756153

Following gene: 170755890

Centisome position: 83.01

GC content: 22.4

Gene sequence:

>366_bases
ATGGTTAATATGAATAGAGGAAAAATAAGCAAAAATATATATGAACATCTAGAAAAAAAAGACTTATTAAGAGAAATAAA
AATATTAAGAATAGGTAAAAATGCTTTTGAAGAAAAACTAGATGAAGTGTATGTATGCACTATAAGGGGATATTATTATA
GAAATAATAGTAATATAATTACAACTTCTATGGAAGGACTGGAATTTAATAATTTATATAATGATAAATTATTAATTACC
TATAATGATATAAGTTCTAAAATACAAAAGGATGATTATTTTATATTAGATGGAACTAAGTATGAAATAGTTGACACAGG
AAATATTCAAAACCTAGTATTTGATATGATATTAAACAGGGTGTGA

Upstream 100 bases:

>100_bases
AAAGTAATAGAGCCTATTGGTTAACTCTAGCAGAGCATTTCAAAGAAGAGCAAAAGATTCTAAAGAATCAAACTTCTATG
GAAAGAGTTGATGAATATTA

Downstream 100 bases:

>100_bases
TGATATGAGTGAATTTGAAGTAAATATAGATAGTGTTATTGATGGATTATCTGAATTTGAGATGCAATCTAAAACTGCTA
TAAGTGGGTATGCAGATATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNIITTSMEGLEFNNLYNDKLLIT
YNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNRV

Sequences:

>Translated_121_residues
MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNIITTSMEGLEFNNLYNDKLLIT
YNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNRV
>Mature_121_residues
MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNIITTSMEGLEFNNLYNDKLLIT
YNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14345; Mature: 14345

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNII
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCEEEEEEEEEEEEECCCEEE
TTSMEGLEFNNLYNDKLLITYNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNR
EEECCCEEECCCCCCEEEEEECCCCHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHC
V
C
>Mature Secondary Structure
MVNMNRGKISKNIYEHLEKKDLLREIKILRIGKNAFEEKLDEVYVCTIRGYYYRNNSNII
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHCEEEEEEEEEEEEECCCEEE
TTSMEGLEFNNLYNDKLLITYNDISSKIQKDDYFILDGTKYEIVDTGNIQNLVFDMILNR
EEECCCEEECCCCCCEEEEEECCCCHHHCCCCEEEECCCEEEEEECCCHHHHHHHHHHHC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA