Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

Click here to switch to the map view.

The map label for this gene is 170755237

Identifier: 170755237

GI number: 170755237

Start: 883962

End: 885098

Strand: Direct

Name: 170755237

Synonym: CLD_3798

Alternate gene names: NA

Gene position: 883962-885098 (Clockwise)

Preceding gene: 170757534

Following gene: 170756063

Centisome position: 22.33

GC content: 24.71

Gene sequence:

>1137_bases
ATGACTAAATATATTTGGCAAGAACTTAAAAGAGTATTAATTAAAAAGAAAATTTCACTTATTATTATTCTTATCCTTAC
CATAGTTTTTGGTGGAGCAAACATTTTAAAACAAAAAACTTTAGAGGAAAAGCTTGAGCAGAATAAAGTTATTCTTAATA
ATCAAATAAACTCTAAAAAAGATGAAAAAACTATAAATAATACAAGAGAACAAATATCTGATATAGAAAAAACCTTAAGT
ATGATAAAAGGCTATGATAAATCAAAAATAGATGGAAAAATATTAAAATTAGAAAAAGAAAATAATCCCAAAAATGATAA
TGAAATAAAAAAATTAAAATATGAAAAAAAGCACAATATAGACAAAAATGAACTAGTGCCCAAGGGAATCTATGCAACTA
TTAATATTTTAGGAGTATCAGATATATCTATATTATATATAATTATTCTAATTGTACTTTTATCTGATATAGTATCAGGG
GAATATAGTCCTAACACTATTAAAATGTCCCTTACTAAACCTATATCAAGAAAAAAAATTATAATATCAAAGTTTGCTGT
TTCTATAATTATAGGTGCAAGTGTCATAATTATAAGTACAATAATATTTGTAGTAGAGGCTGGAATTCGTTTTGGACTGT
CAGATTATAGAATGCCAGTTTATCTAGGGACAAAGTATGTTTTAAATAAATCACTACCTTTAACTGTAGAAACTTCACAA
ATGGAGCGCGTAGCAAATAGTATTTCAATAGTTCCTCTTTGGAGTATGATTGTTCGATTCATGTTAATTGCTATACTTGT
TTCAATAGTATCTATATCAATACTAATGTTTATATCAACTCTTTGCAAAAGATCACTTATTTCATCTATTATAAATTTTA
TATTAGTTATAGTAACATCACTTTTTTATTTGTGGAGATTTAGCGGGGATAATATTCTAGCTAATAAATATGGTGCTTTA
TTAAAATTTACGCCTATTCCTTATATGCTTGAAATTTTTGAAGTTTTATCAGGAGGTGTATCTATAAGGCTTGCAAGTAG
TATAAACATATTTTTTATTTTAATTGTATGTTTAAGTTGGAGTTTAATTATGATGTTTTTAAGTACTTATATTTTTACAA
AGAGAGATTTTGATTAA

Upstream 100 bases:

>100_bases
TTAATAGCCTTACATAATGAAGGAGTAAACGTAGAAGGTTTTTCTGAAGTAAAAGAAAAATTAGAGGATAAATTTATAAA
AATAGTGGGGGATAATAATA

Downstream 100 bases:

>100_bases
AATCATATAAAGTTAGATATACACTAGGTACAAAAGTATCTAGTGTTTTTTTATAGATGTATAGTTTAAGTCATACAAAA
TATAAATGGAAATCTTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MTKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKKDEKTINNTREQISDIEKTLS
MIKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNIDKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSG
EYSPNTIKMSLTKPISRKKIIISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQ
MERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTSLFYLWRFSGDNILANKYGAL
LKFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSWSLIMMFLSTYIFTKRDFD

Sequences:

>Translated_378_residues
MTKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKKDEKTINNTREQISDIEKTLS
MIKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNIDKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSG
EYSPNTIKMSLTKPISRKKIIISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQ
MERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTSLFYLWRFSGDNILANKYGAL
LKFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSWSLIMMFLSTYIFTKRDFD
>Mature_377_residues
TKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKKDEKTINNTREQISDIEKTLSM
IKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNIDKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSGE
YSPNTIKMSLTKPISRKKIIISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQM
ERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTSLFYLWRFSGDNILANKYGALL
KFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSWSLIMMFLSTYIFTKRDFD

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42994; Mature: 42863

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCH
DEKTINNTREQISDIEKTLSMIKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC
DKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSGEYSPNTIKMSLTKPISRKKI
CHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH
IISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCCEEEEHHH
MERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTS
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFYLWRFSGDNILANKYGALLKFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSW
HHHHHHCCCCCEEHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH
SLIMMFLSTYIFTKRDFD
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TKYIWQELKRVLIKKKISLIIILILTIVFGGANILKQKTLEEKLEQNKVILNNQINSKK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCH
DEKTINNTREQISDIEKTLSMIKGYDKSKIDGKILKLEKENNPKNDNEIKKLKYEKKHNI
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCC
DKNELVPKGIYATINILGVSDISILYIIILIVLLSDIVSGEYSPNTIKMSLTKPISRKKI
CHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHH
IISKFAVSIIIGASVIIISTIIFVVEAGIRFGLSDYRMPVYLGTKYVLNKSLPLTVETSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCCCCEEEEHHH
MERVANSISIVPLWSMIVRFMLIAILVSIVSISILMFISTLCKRSLISSIINFILVIVTS
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFYLWRFSGDNILANKYGALLKFTPIPYMLEIFEVLSGGVSIRLASSINIFFILIVCLSW
HHHHHHCCCCCEEHHCCCCEEEECCCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHH
SLIMMFLSTYIFTKRDFD
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA