| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is noxA
Identifier: 170755183
GI number: 170755183
Start: 1477794
End: 1479020
Strand: Direct
Name: noxA
Synonym: CLD_3224
Alternate gene names: 170755183
Gene position: 1477794-1479020 (Clockwise)
Preceding gene: 170754395
Following gene: 170756446
Centisome position: 37.33
GC content: 29.34
Gene sequence:
>1227_bases ATGAAATATGTGATAATAGGGGCTAGTGCAGCAGGAATTTCAGCAGTTAAAACTTTGAGAACATTAGATAAAGATTCTCA AATAGTTATGATTTCTAAAGATGATAAAGTATATTCAAGATGTTTGTTGCATCATTTTATAGGTGGAAATAGAGAAATAG AAGGATTATCTTTTATAGAAAAGGATTTTTTCGCTAAGTATAATGTAAAATGGATAAAAAATAAAAAAGTAGAAACTGTA GATATAGATAAAAAGATAGTAAAAGTGCAAGGAGAAATTTCAGAACATTATGATAAATTGCTTATAGCGTCAGGATCTTA CGCGTCTATACCACCAATTAAAAATCTAAGAGAAGCTAAAAGGGTGTACACTCTAAGAGATTTAGATGATGCAATAGCTA TAAAAGAAGAGGCTAAAAAAATCAAAAAAGCAGTGGTAATAGGAGCAGGATTAGTAGGGATAGATGCGACTATGGGATTA TTAGAGAACAATGTAGAAGTAACTGTTGTAGAAATGGGAAATAGAATGCTTCCACTGCAATTAGACCAAAGAGCATCAAA AGCTTACGAAGAATTATTTAGAAAGCACAATGTTAATATAAAAACCAGTGTAGGAGCTGAAGAAGCTTTAATAGATGAGA ATGGAAACGTTTGTGGAATAAAATTAAATAATGGTGAAAAGATAGATTGTGATATTATAGTTGTAGCAGCAGGAGTTAGA CCTAATATAGATTTTATAAAGGATGAAAGAATAAAGATAGAAAGAGGCATAGTTATAAATGATAATTGTGAAACTACAGT TAAAGATATATATGCTGCAGGAGACGTAACCTTTAGAGCACCTATATGGCCAATAGCTATGAAACAAGGAAGAATAGCTG CCTATAATATGGCAGGAGAAAAAAAGTTATTAGATGATAATTTTGGTGCAAGAAATTCTATGAATTTTCTAGGAGTATAC ACTATATCTTTAGGTTTAGTAGAGCCAAAAGATGACAGTTATAAAGTAGATATAATAGATAAAAATGGAGTTTATAAAAA AATAATACACAAAGATGGAATCATATATGGAGCTATACTTCAGGGGGATATAGCTTATGCTGGAGTATTAACAGAGCTAA TAAAAAATAAAATAGATATATCAAAAATAAATAAGGATATATTTGATATAAGTTTTGCTGACTTTTTTAATATAAAAGAA AATGGAGAATTTAGTTACAGAAAATAA
Upstream 100 bases:
>100_bases GGATGCAAATAAATTAGCAGAGATTAGTATAAAATTTTCTTTAATAAGAATTTGATTTTATAATATTATAAAAAATATTA AGGCTCAGGAGGTAAACAAT
Downstream 100 bases:
>100_bases GAAAAATATTTAGTGTTTCCATGAGGCTGTTGATAAACATATTTTATCAACAGCTTTTTAATTTGTATAAAAAGTATTTT AAGGTTTTTAAAATAATAAT
Product: nitrate reductase, NADH oxidase subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MKYVIIGASAAGISAVKTLRTLDKDSQIVMISKDDKVYSRCLLHHFIGGNREIEGLSFIEKDFFAKYNVKWIKNKKVETV DIDKKIVKVQGEISEHYDKLLIASGSYASIPPIKNLREAKRVYTLRDLDDAIAIKEEAKKIKKAVVIGAGLVGIDATMGL LENNVEVTVVEMGNRMLPLQLDQRASKAYEELFRKHNVNIKTSVGAEEALIDENGNVCGIKLNNGEKIDCDIIVVAAGVR PNIDFIKDERIKIERGIVINDNCETTVKDIYAAGDVTFRAPIWPIAMKQGRIAAYNMAGEKKLLDDNFGARNSMNFLGVY TISLGLVEPKDDSYKVDIIDKNGVYKKIIHKDGIIYGAILQGDIAYAGVLTELIKNKIDISKINKDIFDISFADFFNIKE NGEFSYRK
Sequences:
>Translated_408_residues MKYVIIGASAAGISAVKTLRTLDKDSQIVMISKDDKVYSRCLLHHFIGGNREIEGLSFIEKDFFAKYNVKWIKNKKVETV DIDKKIVKVQGEISEHYDKLLIASGSYASIPPIKNLREAKRVYTLRDLDDAIAIKEEAKKIKKAVVIGAGLVGIDATMGL LENNVEVTVVEMGNRMLPLQLDQRASKAYEELFRKHNVNIKTSVGAEEALIDENGNVCGIKLNNGEKIDCDIIVVAAGVR PNIDFIKDERIKIERGIVINDNCETTVKDIYAAGDVTFRAPIWPIAMKQGRIAAYNMAGEKKLLDDNFGARNSMNFLGVY TISLGLVEPKDDSYKVDIIDKNGVYKKIIHKDGIIYGAILQGDIAYAGVLTELIKNKIDISKINKDIFDISFADFFNIKE NGEFSYRK >Mature_408_residues MKYVIIGASAAGISAVKTLRTLDKDSQIVMISKDDKVYSRCLLHHFIGGNREIEGLSFIEKDFFAKYNVKWIKNKKVETV DIDKKIVKVQGEISEHYDKLLIASGSYASIPPIKNLREAKRVYTLRDLDDAIAIKEEAKKIKKAVVIGAGLVGIDATMGL LENNVEVTVVEMGNRMLPLQLDQRASKAYEELFRKHNVNIKTSVGAEEALIDENGNVCGIKLNNGEKIDCDIIVVAAGVR PNIDFIKDERIKIERGIVINDNCETTVKDIYAAGDVTFRAPIWPIAMKQGRIAAYNMAGEKKLLDDNFGARNSMNFLGVY TISLGLVEPKDDSYKVDIIDKNGVYKKIIHKDGIIYGAILQGDIAYAGVLTELIKNKIDISKINKDIFDISFADFFNIKE NGEFSYRK
Specific function: Required for nitrite assimilation [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]
Homologues:
Organism=Homo sapiens, GI21389617, Length=312, Percent_Identity=29.8076923076923, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI65787454, Length=312, Percent_Identity=29.8076923076923, Blast_Score=115, Evalue=5e-26, Organism=Homo sapiens, GI226437568, Length=312, Percent_Identity=29.8076923076923, Blast_Score=115, Evalue=7e-26, Organism=Escherichia coli, GI1789765, Length=403, Percent_Identity=26.0545905707196, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789065, Length=306, Percent_Identity=23.8562091503268, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788892, Length=220, Percent_Identity=26.3636363636364, Blast_Score=83, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17559934, Length=319, Percent_Identity=25.0783699059561, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24639257, Length=352, Percent_Identity=25.5681818181818, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI281359715, Length=352, Percent_Identity=25.5681818181818, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI281359713, Length=352, Percent_Identity=25.5681818181818, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24639250, Length=352, Percent_Identity=25.5681818181818, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI18543267, Length=352, Percent_Identity=25.5681818181818, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24639252, Length=352, Percent_Identity=25.5681818181818, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI24585130, Length=312, Percent_Identity=24.0384615384615, Blast_Score=105, Evalue=8e-23, Organism=Drosophila melanogaster, GI24581020, Length=359, Percent_Identity=25.6267409470752, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI28573993, Length=359, Percent_Identity=25.6267409470752, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI24585384, Length=228, Percent_Identity=27.1929824561404, Blast_Score=75, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007419 - InterPro: IPR013027 - InterPro: IPR005117 - InterPro: IPR012744 - InterPro: IPR017121 - InterPro: IPR006067 - InterPro: IPR006066 - InterPro: IPR001327 [H]
Pfam domain/function: PF04324 Fer2_BFD; PF01077 NIR_SIR; PF03460 NIR_SIR_ferr; PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.7.1.4 [H]
Molecular weight: Translated: 45549; Mature: 45549
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVIIGASAAGISAVKTLRTLDKDSQIVMISKDDKVYSRCLLHHFIGGNREIEGLSFIE CEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHH KDFFAKYNVKWIKNKKVETVDIDKKIVKVQGEISEHYDKLLIASGSYASIPPIKNLREAK HHHHHCCCEEEECCCCEEEEECCCEEEEEECCHHHCCCEEEEECCCCCCCCCHHHHHHHH RVYTLRDLDDAIAIKEEAKKIKKAVVIGAGLVGIDATMGLLENNVEVTVVEMGNRMLPLQ HEEEECCCCHHHHHHHHHHHHHHHEEEECCEEEHHHHHHHHCCCCEEEEEECCCEEECEE LDQRASKAYEELFRKHNVNIKTSVGAEEALIDENGNVCGIKLNNGEKIDCDIIVVAAGVR HHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCEEEEEECCCCEEEEEEEEEEECCC PNIDFIKDERIKIERGIVINDNCETTVKDIYAAGDVTFRAPIWPIAMKQGRIAAYNMAGE CCCCEECCCCEEEECCEEECCCCCHHHHHHHCCCCEEEECCCCEEEECCCCEEEEECCCC KKLLDDNFGARNSMNFLGVYTISLGLVEPKDDSYKVDIIDKNGVYKKIIHKDGIIYGAIL CEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEEEEEEE QGDIAYAGVLTELIKNKIDISKINKDIFDISFADFFNIKENGEFSYRK ECCHHHHHHHHHHHHCCCCHHHHCCHHHEEEHHHEECCCCCCCCCCCC >Mature Secondary Structure MKYVIIGASAAGISAVKTLRTLDKDSQIVMISKDDKVYSRCLLHHFIGGNREIEGLSFIE CEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHH KDFFAKYNVKWIKNKKVETVDIDKKIVKVQGEISEHYDKLLIASGSYASIPPIKNLREAK HHHHHCCCEEEECCCCEEEEECCCEEEEEECCHHHCCCEEEEECCCCCCCCCHHHHHHHH RVYTLRDLDDAIAIKEEAKKIKKAVVIGAGLVGIDATMGLLENNVEVTVVEMGNRMLPLQ HEEEECCCCHHHHHHHHHHHHHHHEEEECCEEEHHHHHHHHCCCCEEEEEECCCEEECEE LDQRASKAYEELFRKHNVNIKTSVGAEEALIDENGNVCGIKLNNGEKIDCDIIVVAAGVR HHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCCCEEEEEECCCCEEEEEEEEEEECCC PNIDFIKDERIKIERGIVINDNCETTVKDIYAAGDVTFRAPIWPIAMKQGRIAAYNMAGE CCCCEECCCCEEEECCEEECCCCCHHHHHHHCCCCEEEECCCCEEEECCCCEEEEECCCC KKLLDDNFGARNSMNFLGVYTISLGLVEPKDDSYKVDIIDKNGVYKKIIHKDGIIYGAIL CEECCCCCCCCCCCCEEEEEEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCEEEEEEE QGDIAYAGVLTELIKNKIDISKINKDIFDISFADFFNIKENGEFSYRK ECCHHHHHHHHHHHHCCCCHHHHCCHHHEEEHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]