Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170755077

Identifier: 170755077

GI number: 170755077

Start: 2292474

End: 2292827

Strand: Reverse

Name: 170755077

Synonym: CLD_2488

Alternate gene names: NA

Gene position: 2292827-2292474 (Counterclockwise)

Preceding gene: 170754654

Following gene: 170757494

Centisome position: 57.93

GC content: 28.25

Gene sequence:

>354_bases
ATGATAATTTGGGGCTGGGGAAAAGTAACCAAAAAGATTATTGGAGCAGTTTTTGAACGCACATGTAACTATTGTAATAC
TGATGAAGTTTGGAATTTATGTGTTGTAAGAACATGGTTTACGTTATTTTTTATTCCTATAATACCTTATAAAAAACAAT
ATTGCATTGCTTGCCCAAAATGCTGGAGCTATATAGAACTTACACAGGAGGAATTTGAAAAAATAAAAATTGATATAACC
TCTAGTTCTAATAATATTAATGAAAAAGTTGTTACTGATAATATAAGATATGCTGGAAAGACAGAAACTCAAATTAATTA
TTTAAAACAGATGGAGGAATATGCTAATAAGTAA

Upstream 100 bases:

>100_bases
TCTATTATATTCAGAGGATTATGTATATTTATGTTATATATTGTAATAAATATAGTCCAATGGTATAATTGTGAAGAAAT
AATTTATATGAGGTGATAAA

Downstream 100 bases:

>100_bases
ATTATTAAAATCTGTTGATTTATAATAAAAATTTTAATTTGATAACTTTTATAAGTTTATAAAATATAGGTTCAACTGGA
AATTGCTATAGGAGATAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MIIWGWGKVTKKIIGAVFERTCNYCNTDEVWNLCVVRTWFTLFFIPIIPYKKQYCIACPKCWSYIELTQEEFEKIKIDIT
SSSNNINEKVVTDNIRYAGKTETQINYLKQMEEYANK

Sequences:

>Translated_117_residues
MIIWGWGKVTKKIIGAVFERTCNYCNTDEVWNLCVVRTWFTLFFIPIIPYKKQYCIACPKCWSYIELTQEEFEKIKIDIT
SSSNNINEKVVTDNIRYAGKTETQINYLKQMEEYANK
>Mature_117_residues
MIIWGWGKVTKKIIGAVFERTCNYCNTDEVWNLCVVRTWFTLFFIPIIPYKKQYCIACPKCWSYIELTQEEFEKIKIDIT
SSSNNINEKVVTDNIRYAGKTETQINYLKQMEEYANK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13898; Mature: 13898

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIWGWGKVTKKIIGAVFERTCNYCNTDEVWNLCVVRTWFTLFFIPIIPYKKQYCIACPK
CEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHH
CWSYIELTQEEFEKIKIDITSSSNNINEKVVTDNIRYAGKTETQINYLKQMEEYANK
HHHHHHHHHHHHHEEEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIIWGWGKVTKKIIGAVFERTCNYCNTDEVWNLCVVRTWFTLFFIPIIPYKKQYCIACPK
CEEECHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHH
CWSYIELTQEEFEKIKIDITSSSNNINEKVVTDNIRYAGKTETQINYLKQMEEYANK
HHHHHHHHHHHHHEEEEEEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA