Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754903

Identifier: 170754903

GI number: 170754903

Start: 1340664

End: 1341410

Strand: Direct

Name: 170754903

Synonym: CLD_3361

Alternate gene names: NA

Gene position: 1340664-1341410 (Clockwise)

Preceding gene: 170754863

Following gene: 170757041

Centisome position: 33.87

GC content: 23.43

Gene sequence:

>747_bases
ATGGAAAAAAGTAATAAAATTTGTAAATATCAATTAACGACTTCTATAAAACCTATATTGATTTATTATAGTATATTAAT
AGGATTCTTATTATTAATATTAATAGAAAAATTTACGTCTCGAAATAGCAATGTTCAGTCAAGTGGTATAGAAATGTCAA
CGGCAATTTTTATTTTTATAATGGCATTAAATTCATTTAAATCTCCATTTTATTTTTCTCAAGGAAATAATATTTCAAGA
AATAGCTTTATTATTGGAACTATAAAGGCAGGAATAATAATGGCAGCAGCTTTATCCTTAATTGATGTAATTATAAATAG
AATATATAATATATTTATAATTTGCCCTACTAACTTTGATATGATCTATACAAAAGCGATATATAGTATAGATACTGGTT
GGGAGCCTATATTAACTCATAGTATTTTCAACTCATTTGGAACCTATATATGGACTTTTGCAGTATATGTATTTTTATTT
ATGCTAGGGTTATTAATAACTATAATTTATTTTAGATTAAATAAACTAGGACAAATAGTATTATCATTCTTTCCAGTTAT
ATTAATTGTAGTTACAAGTGGTTTCTATAGTTATATTCCTACTGGAGTGTGGGAATTTATTGAAAATGCTTTTGGAATTA
ATACTAAAAATCCTTATATAGCAATCATAACATTTATTATACTAAGTATTTTAGCAATAGCAGGACAATATTTATTAATT
AAAAAAGCAGTTACAGATAAAAATTAA

Upstream 100 bases:

>100_bases
TAAAGAAGATTTAGATAATATAAAAAAACTAGAATTAGAAATTAGCACAGTAGAACTTCAAAAACTATTTATATATTTAA
CAAATATGGAGGAAAAATAG

Downstream 100 bases:

>100_bases
TAGAAAACAATGAATCTAAACTTGCTAATGTGAGAGCATTAAGTTGAATATTGTAAAATAAATAAATTTAAGCTTCAAGG
GAGTTAAAACTCTACTAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MEKSNKICKYQLTTSIKPILIYYSILIGFLLLILIEKFTSRNSNVQSSGIEMSTAIFIFIMALNSFKSPFYFSQGNNISR
NSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFDMIYTKAIYSIDTGWEPILTHSIFNSFGTYIWTFAVYVFLF
MLGLLITIIYFRLNKLGQIVLSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAIITFIILSILAIAGQYLLI
KKAVTDKN

Sequences:

>Translated_248_residues
MEKSNKICKYQLTTSIKPILIYYSILIGFLLLILIEKFTSRNSNVQSSGIEMSTAIFIFIMALNSFKSPFYFSQGNNISR
NSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFDMIYTKAIYSIDTGWEPILTHSIFNSFGTYIWTFAVYVFLF
MLGLLITIIYFRLNKLGQIVLSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAIITFIILSILAIAGQYLLI
KKAVTDKN
>Mature_248_residues
MEKSNKICKYQLTTSIKPILIYYSILIGFLLLILIEKFTSRNSNVQSSGIEMSTAIFIFIMALNSFKSPFYFSQGNNISR
NSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFDMIYTKAIYSIDTGWEPILTHSIFNSFGTYIWTFAVYVFLF
MLGLLITIIYFRLNKLGQIVLSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAIITFIILSILAIAGQYLLI
KKAVTDKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28141; Mature: 28141

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSNKICKYQLTTSIKPILIYYSILIGFLLLILIEKFTSRNSNVQSSGIEMSTAIFIFI
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
MALNSFKSPFYFSQGNNISRNSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFD
HHHHHCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
MIYTKAIYSIDTGWEPILTHSIFNSFGTYIWTFAVYVFLFMLGLLITIIYFRLNKLGQIV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAIITFIILSILAIAGQYLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHH
KKAVTDKN
HHHHCCCC
>Mature Secondary Structure
MEKSNKICKYQLTTSIKPILIYYSILIGFLLLILIEKFTSRNSNVQSSGIEMSTAIFIFI
CCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
MALNSFKSPFYFSQGNNISRNSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFD
HHHHHCCCCEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC
MIYTKAIYSIDTGWEPILTHSIFNSFGTYIWTFAVYVFLFMLGLLITIIYFRLNKLGQIV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAIITFIILSILAIAGQYLLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHH
KKAVTDKN
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA