Click here to switch to the map view.

The map label for this gene is etfB [H]

Identifier: 170754881

GI number: 170754881

Start: 3475114

End: 3475893

Strand: Reverse

Name: etfB [H]

Synonym: CLD_1333

Alternate gene names: 170754881

Gene position: 3475893-3475114 (Counterclockwise)

Preceding gene: 170755246

Following gene: 170755641

Centisome position: 87.81

GC content: 32.18

Gene sequence:

>780_bases
ATGAATATAGTTGTTTGTTTGAAACAAGTACCAGATACAAATGAAGTTAAGATAGATCCCATAAAAGGAACTTTAATAAG
AGAAGGAGTTCCATCTATTATAAATCCCGATGATAAAAATGCTTTAGAGGAAGCTTTAATATTAAAAGAAAATAATGGTG
CAAGAGTTACTGTAATAAGTATGGGACCACCACAAGCTAAAGATGCATTAAGAGAAGCTTTAGCTATGGGAGCTGATGAG
GCAATACTTATATCAGATAGAGCTTTTGCAGGAGCGGATACATTAGCAACATCCTATGCGCTAGCAACTGCTGCAAAAAA
ATTAGATTACGATATAATATTTGCAGGAAGACAAGCTATAGATGGAGATACAGCGCAAGTAGGACCAGAAATGGCTGAAC
ATCTAAATATACCTCAAGTTACTTATGTAGAAAAAGTAGAAGTACATGATGATGAATTAGAGGTTAAAAAATCATTGGAA
GATGGATATGAAATAGTATCTGTAAAAATGCCAGTACTTCTAACTGCTATAAAAGATTTAAATACTCCACGATATATGCA
TATGGCTAAAATATTCGAATGCTTTAATAAAGAAATAAAAGTATGGAGTGCAGAGGATATTGAAGCTGACAAATCACTAT
TAGGGCTTTCAGGTTCACCAACTAAAGTAAAAAAATCTGTTACAAAGGAAACAAAAAGAGAAGGTGTTTTAATAAATAAG
CCTTTTAAAGAAGCAGCACAATATGCAGTAGAAAAATTAAAAGAAAAACACTATATTTAG

Upstream 100 bases:

>100_bases
AATGTTAAGAGATGCTAGAATAACTGAAATATATGAAGGGACTTCAGAAGTTCAAAAAATGGTTATAGCTAGTAGTTTAT
TACACTAGGAGGAGTTTTAT

Downstream 100 bases:

>100_bases
GTTGGGGGAGATATGATGAATTTATCAGATTTTAAAGGCATATGGGTTTTTGCAGAACAGAGAGAAGGAAAGCTTCAAAA
AGTAGCTTTAGAGTTAATAG

Product: electron transfer flavoprotein, beta subunit/FixA family protein

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNIVVCLKQVPDTNEVKIDPIKGTLIREGVPSIINPDDKNALEEALILKENNGARVTVISMGPPQAKDALREALAMGADE
AILISDRAFAGADTLATSYALATAAKKLDYDIIFAGRQAIDGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLE
DGYEIVSVKMPVLLTAIKDLNTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSVTKETKREGVLINK
PFKEAAQYAVEKLKEKHYI

Sequences:

>Translated_259_residues
MNIVVCLKQVPDTNEVKIDPIKGTLIREGVPSIINPDDKNALEEALILKENNGARVTVISMGPPQAKDALREALAMGADE
AILISDRAFAGADTLATSYALATAAKKLDYDIIFAGRQAIDGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLE
DGYEIVSVKMPVLLTAIKDLNTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSVTKETKREGVLINK
PFKEAAQYAVEKLKEKHYI
>Mature_259_residues
MNIVVCLKQVPDTNEVKIDPIKGTLIREGVPSIINPDDKNALEEALILKENNGARVTVISMGPPQAKDALREALAMGADE
AILISDRAFAGADTLATSYALATAAKKLDYDIIFAGRQAIDGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLE
DGYEIVSVKMPVLLTAIKDLNTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSVTKETKREGVLINK
PFKEAAQYAVEKLKEKHYI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=215, Percent_Identity=33.4883720930233, Blast_Score=111, Evalue=6e-25,
Organism=Homo sapiens, GI62420877, Length=201, Percent_Identity=33.8308457711443, Blast_Score=109, Evalue=3e-24,
Organism=Escherichia coli, GI87081682, Length=211, Percent_Identity=35.0710900473934, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367123, Length=262, Percent_Identity=26.7175572519084, Blast_Score=91, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI25141345, Length=215, Percent_Identity=33.953488372093, Blast_Score=114, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6321646, Length=236, Percent_Identity=32.2033898305085, Blast_Score=100, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24651147, Length=215, Percent_Identity=34.4186046511628, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24651145, Length=215, Percent_Identity=34.4186046511628, Blast_Score=105, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28507; Mature: 28507

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVVCLKQVPDTNEVKIDPIKGTLIREGVPSIINPDDKNALEEALILKENNGARVTVIS
CCEEEEEECCCCCCCEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEE
MGPPQAKDALREALAMGADEAILISDRAFAGADTLATSYALATAAKKLDYDIIFAGRQAI
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCC
DGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLEDGYEIVSVKMPVLLTAIKDL
CCCHHHCCHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHC
NTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSVTKETKREGVLINK
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCEEEEC
PFKEAAQYAVEKLKEKHYI
CHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNIVVCLKQVPDTNEVKIDPIKGTLIREGVPSIINPDDKNALEEALILKENNGARVTVIS
CCEEEEEECCCCCCCEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHEEECCCCCEEEEEE
MGPPQAKDALREALAMGADEAILISDRAFAGADTLATSYALATAAKKLDYDIIFAGRQAI
CCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCC
DGDTAQVGPEMAEHLNIPQVTYVEKVEVHDDELEVKKSLEDGYEIVSVKMPVLLTAIKDL
CCCHHHCCHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHC
NTPRYMHMAKIFECFNKEIKVWSAEDIEADKSLLGLSGSPTKVKKSVTKETKREGVLINK
CCCHHHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCEEEEC
PFKEAAQYAVEKLKEKHYI
CHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]