Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754804

Identifier: 170754804

GI number: 170754804

Start: 1879255

End: 1879674

Strand: Reverse

Name: 170754804

Synonym: CLD_2868

Alternate gene names: NA

Gene position: 1879674-1879255 (Counterclockwise)

Preceding gene: 170754707

Following gene: 170755816

Centisome position: 47.49

GC content: 23.33

Gene sequence:

>420_bases
ATGGATAACAAAAATAATAAAAAAGATATTGCTATAGAAGATATAGAGGATATAGAAAATATAGATAGTTTAATAAGCTT
ATCTGATGATTGTATAGAAAAAACATTAACTAGGATAAGAAGTATAAACGCTTTAAGAGATGAACTAATTAAACTCAATT
TAAATCCAGAAGGGTTAATTTATTTTAATAATGAAGTTTATCCTTTACTTTATACTTTAACAAATCTTAGCACCACTTCT
CTAAATCTATCTACTTCTGCTAATTTTCTATCAACTGCTGTATATTTAAAGCCTAAGGATTCTAAAATTAAGGATACTGT
TAAATTAATCTATGAAATGACTGAGCAATGTGAAGATATATATGATTCTTTAAAATATAAAATAGATACTCTTATATGTA
TATCTAAAAAATCCAAATAA

Upstream 100 bases:

>100_bases
ATTCTATAATTAATATATTATTTCTGTTTTATTAATATTTTTCTCTTTTTCATAATAGCTATATATAAATATCAATTTTA
GAATGGATAATTTAATAATT

Downstream 100 bases:

>100_bases
AGGGCTACATCTATTAAATAAGATTTAAGATGTAGCCTATTTAATAGGATCTTCTCCATATCCAGCCTTTTCATACTTGT
AATCTGGAAATTTCAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MDNKNNKKDIAIEDIEDIENIDSLISLSDDCIEKTLTRIRSINALRDELIKLNLNPEGLIYFNNEVYPLLYTLTNLSTTS
LNLSTSANFLSTAVYLKPKDSKIKDTVKLIYEMTEQCEDIYDSLKYKIDTLICISKKSK

Sequences:

>Translated_139_residues
MDNKNNKKDIAIEDIEDIENIDSLISLSDDCIEKTLTRIRSINALRDELIKLNLNPEGLIYFNNEVYPLLYTLTNLSTTS
LNLSTSANFLSTAVYLKPKDSKIKDTVKLIYEMTEQCEDIYDSLKYKIDTLICISKKSK
>Mature_139_residues
MDNKNNKKDIAIEDIEDIENIDSLISLSDDCIEKTLTRIRSINALRDELIKLNLNPEGLIYFNNEVYPLLYTLTNLSTTS
LNLSTSANFLSTAVYLKPKDSKIKDTVKLIYEMTEQCEDIYDSLKYKIDTLICISKKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15950; Mature: 15950

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKNNKKDIAIEDIEDIENIDSLISLSDDCIEKTLTRIRSINALRDELIKLNLNPEGLI
CCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE
YFNNEVYPLLYTLTNLSTTSLNLSTSANFLSTAVYLKPKDSKIKDTVKLIYEMTEQCEDI
EECCCCEEEHHHHHCCCEEEEECCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHH
YDSLKYKIDTLICISKKSK
HHHHHHHHHHEEEEECCCC
>Mature Secondary Structure
MDNKNNKKDIAIEDIEDIENIDSLISLSDDCIEKTLTRIRSINALRDELIKLNLNPEGLI
CCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEE
YFNNEVYPLLYTLTNLSTTSLNLSTSANFLSTAVYLKPKDSKIKDTVKLIYEMTEQCEDI
EECCCCEEEHHHHHCCCEEEEECCCCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHH
YDSLKYKIDTLICISKKSK
HHHHHHHHHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA