| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754794
Identifier: 170754794
GI number: 170754794
Start: 1985773
End: 1986021
Strand: Reverse
Name: 170754794
Synonym: CLD_2778
Alternate gene names: NA
Gene position: 1986021-1985773 (Counterclockwise)
Preceding gene: 170754547
Following gene: 170755597
Centisome position: 50.17
GC content: 26.91
Gene sequence:
>249_bases ATGTTTTCAATTATGGCAATAAAAATTTCTCCTAGAAATGAGATTGCCCCGAATGTTCAAGAGATTTTAACTAGAAATGG TTGCATAATAAAAACAAGATTAGGACTTCATGAAGCTACTAATGATAGTTGTTCAAAGTGTGGTTTAATTTTATTAGAAC TTTTAAATAATAAGAAAGAAGATATAGAGAATCTAAGTAAAGATTTAACTTCTTTAGATGGGGTATCTGTAAAATTATTA GAAATCTAG
Upstream 100 bases:
>100_bases TAAAGCATTCATAAAAGCATATTTAATTTTTAAAGTAGGTTTAAATTAAAGCTATAATTATAAAAAGTTATAATCATACA AGCATAGAGGAGGAGCAAAT
Downstream 100 bases:
>100_bases TACAGAACATATTTTATAAATTAATAGTTATAAATATAAATTTACACAATAAGCTTTAGGTTTATTGTGTTTTTTATTGA TAATTTTATCCAATTAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MFSIMAIKISPRNEIAPNVQEILTRNGCIIKTRLGLHEATNDSCSKCGLILLELLNNKKEDIENLSKDLTSLDGVSVKLL EI
Sequences:
>Translated_82_residues MFSIMAIKISPRNEIAPNVQEILTRNGCIIKTRLGLHEATNDSCSKCGLILLELLNNKKEDIENLSKDLTSLDGVSVKLL EI >Mature_82_residues MFSIMAIKISPRNEIAPNVQEILTRNGCIIKTRLGLHEATNDSCSKCGLILLELLNNKKEDIENLSKDLTSLDGVSVKLL EI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9081; Mature: 9081
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSIMAIKISPRNEIAPNVQEILTRNGCIIKTRLGLHEATNDSCSKCGLILLELLNNKKE CCEEEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHH DIENLSKDLTSLDGVSVKLLEI HHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure MFSIMAIKISPRNEIAPNVQEILTRNGCIIKTRLGLHEATNDSCSKCGLILLELLNNKKE CCEEEEEEECCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHH DIENLSKDLTSLDGVSVKLLEI HHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA