| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754750
Identifier: 170754750
GI number: 170754750
Start: 3766335
End: 3766616
Strand: Reverse
Name: 170754750
Synonym: CLD_1047
Alternate gene names: NA
Gene position: 3766616-3766335 (Counterclockwise)
Preceding gene: 170757409
Following gene: 170755308
Centisome position: 95.16
GC content: 25.18
Gene sequence:
>282_bases TTGGCTAAAGAGTGCCAGATTGGTAGATTGGTTTTATCGAAAGCAGGTAGAGATAAAGATAATAGTTTCATTATAATAGA TATACTAGATGATAATTATGTGTATATATGTGATGGAGATATTCATACTTTAGATAAACCTAAAAAGAAAAAAATTAAAC ATTTGATATTTACCAATATTATTTGTGAAGATATAATAAATCTAAAGGCAACAAGTAACAACATTAAAAATTCTGTAATA AAAAAATTTATGCAGTCTCATCAAGTTAATAAGGAGGTTTGA
Upstream 100 bases:
>100_bases TTACTGTAGATGGTAGTTTATCTGCTCATTATGAAAATACTGTAGCTATACTAGATGATGGACCTAAAATAACCACTTTA ATTTAATAGAGGTGAATATA
Downstream 100 bases:
>100_bases ATACCTTATGTCAAAAGATGATGTAATTGAAATGCAAGGTACTGTTTTAGAATCTCTACCTAATGCTATGTTTGAAGTAG AATTAGAAAGCGGTCATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MAKECQIGRLVLSKAGRDKDNSFIIIDILDDNYVYICDGDIHTLDKPKKKKIKHLIFTNIICEDIINLKATSNNIKNSVI KKFMQSHQVNKEV
Sequences:
>Translated_93_residues MAKECQIGRLVLSKAGRDKDNSFIIIDILDDNYVYICDGDIHTLDKPKKKKIKHLIFTNIICEDIINLKATSNNIKNSVI KKFMQSHQVNKEV >Mature_92_residues AKECQIGRLVLSKAGRDKDNSFIIIDILDDNYVYICDGDIHTLDKPKKKKIKHLIFTNIICEDIINLKATSNNIKNSVIK KFMQSHQVNKEV
Specific function: Unknown
COG id: COG2163
COG function: function code J; Ribosomal protein L14E/L6E/L27E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10689; Mature: 10557
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKECQIGRLVLSKAGRDKDNSFIIIDILDDNYVYICDGDIHTLDKPKKKKIKHLIFTNI CCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHH ICEDIINLKATSNNIKNSVIKKFMQSHQVNKEV HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure AKECQIGRLVLSKAGRDKDNSFIIIDILDDNYVYICDGDIHTLDKPKKKKIKHLIFTNI CCCCHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHH ICEDIINLKATSNNIKNSVIKKFMQSHQVNKEV HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA