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The map label for this gene is rsgA

Identifier: 170754729

GI number: 170754729

Start: 2625966

End: 2626844

Strand: Reverse

Name: rsgA

Synonym: CLD_2134

Alternate gene names: 170754729

Gene position: 2626844-2625966 (Counterclockwise)

Preceding gene: 170755628

Following gene: 170755632

Centisome position: 66.36

GC content: 28.56

Gene sequence:

>879_bases
ATGAAAGGAACTATAATAAAGGGTATAGGCGGATTTTATTATATCAAGATAGACAATAGTGAAGAAATTATAGAATGTAA
GGCAAGGGGTAAGTTCAGGCACACTGAACTTACCCCTATGATCGGTGATTATGTAGAAATAAGTATAGATAAAAACAATA
AGGGTGCCATAGAGAAAATATATGAAAGAAGAAGTGAACTATTTAGGCCAGCTGTTGCAAATGTAACTCAAGCTTTAGTG
GTATTTTCTTTTAAAAATCCTGATATAAATATAGATCTTTTAAATAAATTTTTACTTTTATGTGAATACAATAATTTGAA
GGCTATAGTGTGTTTTAATAAAATGGATTTAGTAAATAAAGAGGATTATAAAGATATTATTTCCATGATAGAACAGGCAG
GGTATGATATAATATTTTTAAATGCTGAAAAAGAAAGAAATATGGATATAATTAAAAAGCTAATAAAGGATAATGTAACT
GTATTTTGTGGCCCATCTGGGGTAGGAAAATCTACTATGCTAAACAAAATTATAGGTAAAGAAACCATGATAACAGGTAA
TATAAGTGAAAAATTAAAAAGAGGAAAACATACTACTCGTCATAGTGAACTTATATATGTAGATGAAGGACTATTAGTGG
ATACTCCTGGATTTTCTTCTTTAGATATAAATTTTATGGAAAAAGAAGATTTATTGCATTGTATCCCAGAGTTTCGTGAT
TTTATAGGAGAATGTAAGTTTACAGGATGCCTTCATCATAGAGAACCTAATTGTGCAGTAAAAAAAGCAGTAGAGGAAGG
CCATATACACAAAAATAGATATGATTTTTATATAAAAACTTTAGAAGAATTTATGAATAGGAGGAAGAAAAAATGGTAA

Upstream 100 bases:

>100_bases
TTAGAAATGTAGCGATGTGATTTTTATAAGATGTTATATTAGAATGTTAATTGTATAATGAAGTAATTTTAAGATCTGGT
TTAAAAATATTGGAGGTATT

Downstream 100 bases:

>100_bases
AAATAGCGCCATCAATACTTTCAGCAGACTTTTCTAAACTAGGGGAGGACATAAAAAATCTAGATAAATATGGGGCAGAT
GTTATACATATAGATGTAAT

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKGTIIKGIGGFYYIKIDNSEEIIECKARGKFRHTELTPMIGDYVEISIDKNNKGAIEKIYERRSELFRPAVANVTQALV
VFSFKNPDINIDLLNKFLLLCEYNNLKAIVCFNKMDLVNKEDYKDIISMIEQAGYDIIFLNAEKERNMDIIKKLIKDNVT
VFCGPSGVGKSTMLNKIIGKETMITGNISEKLKRGKHTTRHSELIYVDEGLLVDTPGFSSLDINFMEKEDLLHCIPEFRD
FIGECKFTGCLHHREPNCAVKKAVEEGHIHKNRYDFYIKTLEEFMNRRKKKW

Sequences:

>Translated_292_residues
MKGTIIKGIGGFYYIKIDNSEEIIECKARGKFRHTELTPMIGDYVEISIDKNNKGAIEKIYERRSELFRPAVANVTQALV
VFSFKNPDINIDLLNKFLLLCEYNNLKAIVCFNKMDLVNKEDYKDIISMIEQAGYDIIFLNAEKERNMDIIKKLIKDNVT
VFCGPSGVGKSTMLNKIIGKETMITGNISEKLKRGKHTTRHSELIYVDEGLLVDTPGFSSLDINFMEKEDLLHCIPEFRD
FIGECKFTGCLHHREPNCAVKKAVEEGHIHKNRYDFYIKTLEEFMNRRKKKW
>Mature_292_residues
MKGTIIKGIGGFYYIKIDNSEEIIECKARGKFRHTELTPMIGDYVEISIDKNNKGAIEKIYERRSELFRPAVANVTQALV
VFSFKNPDINIDLLNKFLLLCEYNNLKAIVCFNKMDLVNKEDYKDIISMIEQAGYDIIFLNAEKERNMDIIKKLIKDNVT
VFCGPSGVGKSTMLNKIIGKETMITGNISEKLKRGKHTTRHSELIYVDEGLLVDTPGFSSLDINFMEKEDLLHCIPEFRD
FIGECKFTGCLHHREPNCAVKKAVEEGHIHKNRYDFYIKTLEEFMNRRKKKW

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=253, Percent_Identity=29.2490118577075, Blast_Score=143, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 33765; Mature: 33765

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTIIKGIGGFYYIKIDNSEEIIECKARGKFRHTELTPMIGDYVEISIDKNNKGAIEKI
CCCCEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH
YERRSELFRPAVANVTQALVVFSFKNPDINIDLLNKFLLLCEYNNLKAIVCFNKMDLVNK
HHHHHHHHCHHHHHHHEEEEEEEECCCCCCHHHHHHHEEEEECCCEEEEEEECCCCCCCC
EDYKDIISMIEQAGYDIIFLNAEKERNMDIIKKLIKDNVTVFCGPSGVGKSTMLNKIIGK
HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCC
ETMITGNISEKLKRGKHTTRHSELIYVDEGLLVDTPGFSSLDINFMEKEDLLHCIPEFRD
CEEEECCHHHHHHCCCCCCCCCEEEEEECCEEEECCCCCEEEEEEECHHHHHHHHHHHHH
FIGECKFTGCLHHREPNCAVKKAVEEGHIHKNRYDFYIKTLEEFMNRRKKKW
HHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKGTIIKGIGGFYYIKIDNSEEIIECKARGKFRHTELTPMIGDYVEISIDKNNKGAIEKI
CCCCEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHH
YERRSELFRPAVANVTQALVVFSFKNPDINIDLLNKFLLLCEYNNLKAIVCFNKMDLVNK
HHHHHHHHCHHHHHHHEEEEEEEECCCCCCHHHHHHHEEEEECCCEEEEEEECCCCCCCC
EDYKDIISMIEQAGYDIIFLNAEKERNMDIIKKLIKDNVTVFCGPSGVGKSTMLNKIIGK
HHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCC
ETMITGNISEKLKRGKHTTRHSELIYVDEGLLVDTPGFSSLDINFMEKEDLLHCIPEFRD
CEEEECCHHHHHHCCCCCCCCCEEEEEECCEEEECCCCCEEEEEEECHHHHHHHHHHHHH
FIGECKFTGCLHHREPNCAVKKAVEEGHIHKNRYDFYIKTLEEFMNRRKKKW
HHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA