Definition Clostridium botulinum B1 str. Okra, complete genome.
Accession NC_010516
Length 3,958,233

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The map label for this gene is 170754636

Identifier: 170754636

GI number: 170754636

Start: 515089

End: 516450

Strand: Reverse

Name: 170754636

Synonym: CLD_0339

Alternate gene names: NA

Gene position: 516450-515089 (Counterclockwise)

Preceding gene: 170756756

Following gene: 170755869

Centisome position: 13.05

GC content: 26.87

Gene sequence:

>1362_bases
GTGTGTAAAATTAATATAAAATCTTTTTTCAGCATAATAATTTCAAAAATGGTTCTAAAGCTGTCTAAAACACTTTTTAA
AGGTGGAACCAACTTCCCGGGAAAAGTTGCTTTAAAATTAGATAAAAAAATATTAAAAACAATAGCTAAGGATTACAAAG
TAATCCTTGTAACAGGAACTAATGGTAAAACCACCACAACTAGTATGATATACAATATGATTAAAGACAGTAATAAATTT
GTAATATCCAACAGTACTGGTGCAAATATGTTTCCAGGCATAGTAGCTTGTTTTGTAGAAAACTTTTCTTTCAATAATAA
AGAAGAAAAATATGCGGTTATAGAAGTAGATGAAGCCAATGTGAAATTTATTACAGAATATGTATCTCCAGAAATAATAA
CTATAACAAACCTATTTAGAGATCAACTAGATAGGTATGGAGAAGTTTATACTACTTTAAAAAAAATATTAGAGGGTATT
GAAAAATCTCCAAATTCAAAACTTATATTAAATGGGGACGAGTCACTTTTAGGTGATTTAAATAATTCTCTTCCTAATAA
AGTTCTATATTATGGATTTTCACATTTTAAAAATGCTGATACTGTAATAGATGTAAATGCAGATTCAAAATTTTGTAAAA
AGTGTAAACATCCTTATTCTTATGAATTTTTAACTTATAATCATTTAGGAAGCTACTACTGTGAACACTGCGGATATAAA
AGACCTAATATAACCTTCTCTTTAGATGAAGTAGAAGATTTAACCCCTGAGGGTTCTTTAGTTATAATAGATAATCAAGA
ATACTACATAAATCAACCTGGACTATATAATGTTTATAATGCCCTATGTGCTTATTCTATGGCTAAAACATTAGGTATAG
AAAAATCTATCATATTTAATTCATTAAAGAGTCAAAAGAGTAGTTTTGGTAGACAAGAAAGTATAAATATAGAAGGTAAG
GATGTTAAAATAATACTAGTTAAGAATCCTGCTGGATATGACCAAGCTATAAATACTATAGTTTTAGACAAGAAAAAATT
AAATTTAGCCCTACTTTTAAATGATAACTATGCAGATGGTAGAGATGTATCTTGGATATGGGATGTAAAATTTGAAAAAT
TAAAATCTCTAGATATAGATAATATATTAATCTCTGGTGTAAGATTATACGACATGGCTATAAGATTAAAAATAGCAGGT
CTCCCAAATGAAAAATTTAAAATTTCTCAAAATCATGATAATTTATTAGAGGATATAAAAAGTTGCAAAGAAGAGACCGT
ATATATTTTAGCTACATATACTGCTATGACATCTTTTAGAAAATTTCTAAATTCTAAAGGATATATTAAAAAGTTGTGGT
AA

Upstream 100 bases:

>100_bases
AAAAATTAAATTATGATTTTATTAATATTAATGTAAAATAGTCAAAATTATATTATAATAGTTAGTTGTAATCTTATTTA
TTTAAAAATTTAAAAAGGAA

Downstream 100 bases:

>100_bases
TTAATATATAAAGCAATTAAATTAGGTATTCTAACTAATATAAAGAAGGTGAAATACATGGAACTTAATATATGTCACCT
ATACCCTGATTTATTAAATG

Product: UDP-N-acetylmuramyl tripeptide synthetase-like protein

Products: NA

Alternate protein names: Mur Ligase Family Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase; Mur Ligase; Ligase; UDP-N-Acetylmuramoylalanine-D-Glutamate Ligase; Mur Ligase Middle Domain Protein; Conserved Domain Protein; UDP-N-Acetylmuramyl Tripeptide Synthase-Like Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase MurC; Peptide Ligase; UDP-N-Acetylmuramyl Tripeptide Synthetase Like; Murein Ligase; UDP-N-Acetylmuramoyl-L-Alanyl-D-Glutamate-Lysine Ligase; Udp-N-Acetylmuramyl Tripeptide Synthetase; Cell Wall Biosynthesis Protein Mur Ligase Family; UDP-N-Acetylmuramyl Tripeptide Synthetase Related Protein; Mur Ligase Middle Domain-Containing Protein; UDP-N-Acetylmuramyl Peptide Synthetase

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTIAKDYKVILVTGTNGKTTTTSMIYNMIKDSNKF
VISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEANVKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGI
EKSPNSKLILNGDESLLGDLNNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCEHCGYK
RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFNSLKSQKSSFGRQESINIEGK
DVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADGRDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAG
LPNEKFKISQNHDNLLEDIKSCKEETVYILATYTAMTSFRKFLNSKGYIKKLW

Sequences:

>Translated_453_residues
MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTIAKDYKVILVTGTNGKTTTTSMIYNMIKDSNKF
VISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEANVKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGI
EKSPNSKLILNGDESLLGDLNNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCEHCGYK
RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFNSLKSQKSSFGRQESINIEGK
DVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADGRDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAG
LPNEKFKISQNHDNLLEDIKSCKEETVYILATYTAMTSFRKFLNSKGYIKKLW
>Mature_453_residues
MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTIAKDYKVILVTGTNGKTTTTSMIYNMIKDSNKF
VISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEANVKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGI
EKSPNSKLILNGDESLLGDLNNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCEHCGYK
RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFNSLKSQKSSFGRQESINIEGK
DVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADGRDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAG
LPNEKFKISQNHDNLLEDIKSCKEETVYILATYTAMTSFRKFLNSKGYIKKLW

Specific function: Unknown

COG id: COG0769

COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51534; Mature: 51534

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS01011 FOLYLPOLYGLU_SYNT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTIAKDYKVILVTGT
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEEECC
NGKTTTTSMIYNMIKDSNKFVISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEAN
CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
VKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGIEKSPNSKLILNGDESLLGDL
CEEEEHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH
NNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCEHCGYK
HCCCCCCEEEECHHHCCCCCEEEEECCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCC
RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFN
CCCEEEEHHHHHHCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
SLKSQKSSFGRQESINIEGKDVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADG
HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHEEEEECCCCEEEEEEECCCCCC
RDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAGLPNEKFKISQNHDNLLEDIK
CCCEEEECCCHHHHHCCCCCHHHHCCEEEEEEEEEEEEECCCCCCEEEECCHHHHHHHHH
SCKEETVYILATYTAMTSFRKFLNSKGYIKKLW
HHHHCEEEEEEEHHHHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MCKINIKSFFSIIISKMVLKLSKTLFKGGTNFPGKVALKLDKKILKTIAKDYKVILVTGT
CEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCEEEEEECC
NGKTTTTSMIYNMIKDSNKFVISNSTGANMFPGIVACFVENFSFNNKEEKYAVIEVDEAN
CCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
VKFITEYVSPEIITITNLFRDQLDRYGEVYTTLKKILEGIEKSPNSKLILNGDESLLGDL
CEEEEHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHH
NNSLPNKVLYYGFSHFKNADTVIDVNADSKFCKKCKHPYSYEFLTYNHLGSYYCEHCGYK
HCCCCCCEEEECHHHCCCCCEEEEECCCHHHHHHCCCCCCEEEEEHHHHHHHHHHHCCCC
RPNITFSLDEVEDLTPEGSLVIIDNQEYYINQPGLYNVYNALCAYSMAKTLGIEKSIIFN
CCCEEEEHHHHHHCCCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
SLKSQKSSFGRQESINIEGKDVKIILVKNPAGYDQAINTIVLDKKKLNLALLLNDNYADG
HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHHHHHEEEEECCCCEEEEEEECCCCCC
RDVSWIWDVKFEKLKSLDIDNILISGVRLYDMAIRLKIAGLPNEKFKISQNHDNLLEDIK
CCCEEEECCCHHHHHCCCCCHHHHCCEEEEEEEEEEEEECCCCCCEEEECCHHHHHHHHH
SCKEETVYILATYTAMTSFRKFLNSKGYIKKLW
HHHHCEEEEEEEHHHHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA