| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is yieG [C]
Identifier: 170754613
GI number: 170754613
Start: 3482124
End: 3483416
Strand: Reverse
Name: yieG [C]
Synonym: CLD_1326
Alternate gene names: 170754613
Gene position: 3483416-3482124 (Counterclockwise)
Preceding gene: 170755221
Following gene: 170756897
Centisome position: 88.0
GC content: 31.32
Gene sequence:
>1293_bases ATGGAAAACTATTTTAAGTTAAAAGAAAACGGGACAACTTTTAAAACTGAAATATTGGCAGGCATAACTACTTTTATGAC TATGGCTTATATTTTAGTAGTAAATCCAGGAATTTTATCTCAAGCAGGTATGAATTTTGGAGCAGTGTTTACAGCTACTG CTTTATCAGCAGCTATAGCTACATTACTAACAGGCTTATACGCCAAGCTGCCTTTTGCTCAAGCCCCTGGAATGGGATTG AATGCATTTTTTGCTTTTACTATAGTTAAACAAATGGGATATTCTTGGGAATTTGCTTTAACAGCAGTATTTTTGGAAGG AATAATATTTATATTATTAACAATATTTAATGTTCGTGAGGCTATAGTAAATTCAATACCAAATAATATAAAAAAATCCA TATCTGTTGGTATAGGGTTGTTAATATCTTTTATAGGGTTAGATAATGCTCGGGTAGTAATTCATCCTAAGGATGGAGGA ACTATAGTAGCTTTGGGGAATATAACTAGTGGAGAGGCACTATTAGCTATTATAGGTATATTAATAACTGGTATTTTATT AGCTAAAAATATAAGAGGAGCTCTATTAATAGGTATAGTTATTACTACATTAATAGGTATACCTATGGGTATAACTAAAG TTCCCACAAGTTTTTTTAGTATGCCACCAAGTCTAAGTCCAATATTTTTAAAATTTGAATGGCATAATATATTTACTCCT AATATGTTCATTGCGTTGTTCACGTTATTGTTTATGGATATGTTTGATACGGTAGGAACATTAGTAGGGGTAGCAACTAA AGCAAAAATGTTAGATGAAAATGGCAATGTTCCAAGAGTTAAAGAAGCTTTATTTTGTGATGCTATAGGAACTACCTTAG GAGCTTGCTTAGGAACAAGTACTGTTAGTACTTTTGTAGAGAGTGCATCTGGGGTAGCAGAGGGTGGAAGAACAGGATTA ACAGCAGTATCTACAGCAACTATGTTTTTAATAGCACTATTTATATCACCACTATTTATAATGATACCATCACCAGCTAC AGCGCCATCATTAATATTAGTTGGATTATTTATGATGTCTCCTATAAAAGAAATAGAGCTAGATGACTTTACAGAAGCTA TTCCAGCTTTTCTAACTATAATAATGATGCCATTATCTTATAGTATATCAGACGGTATAGTTTTTGGTGTAGTTTCTTAT ATAGTAATAAAAACATTAACTGGAAAAGTTAAAGATGTAAGTTTAACTACATTTATAATAGGAATACTATTTGTACTTAA ATTCTTTATATAG
Upstream 100 bases:
>100_bases GAAAGCACTGCTAATGTTCGTATTTTTCATTGACTTTGAAATAAGTATTTGATACTATTTATTAGTGTCAAAAAAAGAAG AAAAATAGAAGGTGAACTAT
Downstream 100 bases:
>100_bases ATTTTTTATATTATTATATTAATAAGTAATTGATATTTAAATAAAAAGCTAGTAAATTACAAGGTGTACTCTATAGAGTA GATAATTAAAAAAGTCTACA
Product: xanthine/uracil permease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MENYFKLKENGTTFKTEILAGITTFMTMAYILVVNPGILSQAGMNFGAVFTATALSAAIATLLTGLYAKLPFAQAPGMGL NAFFAFTIVKQMGYSWEFALTAVFLEGIIFILLTIFNVREAIVNSIPNNIKKSISVGIGLLISFIGLDNARVVIHPKDGG TIVALGNITSGEALLAIIGILITGILLAKNIRGALLIGIVITTLIGIPMGITKVPTSFFSMPPSLSPIFLKFEWHNIFTP NMFIALFTLLFMDMFDTVGTLVGVATKAKMLDENGNVPRVKEALFCDAIGTTLGACLGTSTVSTFVESASGVAEGGRTGL TAVSTATMFLIALFISPLFIMIPSPATAPSLILVGLFMMSPIKEIELDDFTEAIPAFLTIIMMPLSYSISDGIVFGVVSY IVIKTLTGKVKDVSLTTFIIGILFVLKFFI
Sequences:
>Translated_430_residues MENYFKLKENGTTFKTEILAGITTFMTMAYILVVNPGILSQAGMNFGAVFTATALSAAIATLLTGLYAKLPFAQAPGMGL NAFFAFTIVKQMGYSWEFALTAVFLEGIIFILLTIFNVREAIVNSIPNNIKKSISVGIGLLISFIGLDNARVVIHPKDGG TIVALGNITSGEALLAIIGILITGILLAKNIRGALLIGIVITTLIGIPMGITKVPTSFFSMPPSLSPIFLKFEWHNIFTP NMFIALFTLLFMDMFDTVGTLVGVATKAKMLDENGNVPRVKEALFCDAIGTTLGACLGTSTVSTFVESASGVAEGGRTGL TAVSTATMFLIALFISPLFIMIPSPATAPSLILVGLFMMSPIKEIELDDFTEAIPAFLTIIMMPLSYSISDGIVFGVVSY IVIKTLTGKVKDVSLTTFIIGILFVLKFFI >Mature_430_residues MENYFKLKENGTTFKTEILAGITTFMTMAYILVVNPGILSQAGMNFGAVFTATALSAAIATLLTGLYAKLPFAQAPGMGL NAFFAFTIVKQMGYSWEFALTAVFLEGIIFILLTIFNVREAIVNSIPNNIKKSISVGIGLLISFIGLDNARVVIHPKDGG TIVALGNITSGEALLAIIGILITGILLAKNIRGALLIGIVITTLIGIPMGITKVPTSFFSMPPSLSPIFLKFEWHNIFTP NMFIALFTLLFMDMFDTVGTLVGVATKAKMLDENGNVPRVKEALFCDAIGTTLGACLGTSTVSTFVESASGVAEGGRTGL TAVSTATMFLIALFISPLFIMIPSPATAPSLILVGLFMMSPIKEIELDDFTEAIPAFLTIIMMPLSYSISDGIVFGVVSY IVIKTLTGKVKDVSLTTFIIGILFVLKFFI
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=427, Percent_Identity=44.7306791569087, Blast_Score=360, Evalue=1e-100, Organism=Escherichia coli, GI87082309, Length=427, Percent_Identity=41.4519906323185, Blast_Score=346, Evalue=2e-96, Organism=Escherichia coli, GI1790499, Length=430, Percent_Identity=30.9302325581395, Blast_Score=225, Evalue=5e-60, Organism=Escherichia coli, GI48994909, Length=425, Percent_Identity=33.1764705882353, Blast_Score=217, Evalue=1e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45891; Mature: 45891
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENYFKLKENGTTFKTEILAGITTFMTMAYILVVNPGILSQAGMNFGAVFTATALSAAIA CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHH TLLTGLYAKLPFAQAPGMGLNAFFAFTIVKQMGYSWEFALTAVFLEGIIFILLTIFNVRE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AIVNSIPNNIKKSISVGIGLLISFIGLDNARVVIHPKDGGTIVALGNITSGEALLAIIGI HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHH LITGILLAKNIRGALLIGIVITTLIGIPMGITKVPTSFFSMPPSLSPIFLKFEWHNIFTP HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCCCCCEEEEEEEECCCCCH NMFIALFTLLFMDMFDTVGTLVGVATKAKMLDENGNVPRVKEALFCDAIGTTLGACLGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TVSTFVESASGVAEGGRTGLTAVSTATMFLIALFISPLFIMIPSPATAPSLILVGLFMMS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHC PIKEIELDDFTEAIPAFLTIIMMPLSYSISDGIVFGVVSYIVIKTLTGKVKDVSLTTFII CHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GILFVLKFFI HHHHHHHHHC >Mature Secondary Structure MENYFKLKENGTTFKTEILAGITTFMTMAYILVVNPGILSQAGMNFGAVFTATALSAAIA CCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHH TLLTGLYAKLPFAQAPGMGLNAFFAFTIVKQMGYSWEFALTAVFLEGIIFILLTIFNVRE HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AIVNSIPNNIKKSISVGIGLLISFIGLDNARVVIHPKDGGTIVALGNITSGEALLAIIGI HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHH LITGILLAKNIRGALLIGIVITTLIGIPMGITKVPTSFFSMPPSLSPIFLKFEWHNIFTP HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHCCHHHHCCCCCCCEEEEEEEECCCCCH NMFIALFTLLFMDMFDTVGTLVGVATKAKMLDENGNVPRVKEALFCDAIGTTLGACLGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH TVSTFVESASGVAEGGRTGLTAVSTATMFLIALFISPLFIMIPSPATAPSLILVGLFMMS HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHC PIKEIELDDFTEAIPAFLTIIMMPLSYSISDGIVFGVVSYIVIKTLTGKVKDVSLTTFII CHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH GILFVLKFFI HHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]