| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754554
Identifier: 170754554
GI number: 170754554
Start: 3944825
End: 3945070
Strand: Reverse
Name: 170754554
Synonym: CLD_0842
Alternate gene names: NA
Gene position: 3945070-3944825 (Counterclockwise)
Preceding gene: 170756720
Following gene: 170755204
Centisome position: 99.67
GC content: 23.98
Gene sequence:
>246_bases ATGAAAAATTATGTAATAACATTTGAAAATACTCATACATCAATGGAAGGAGAAAGTGTTTTAAAAGAAAAAGGAATAAA ACTCATTATAATTCCTACACCAACATATATAACTAAAAGTTGCGGTATAAGCATAAGAATCGATGAACAAGATTATGAAG ATGTAAAAAAAATAATAGAAAGTAAAGAAATAAATATTAAAAATGTATATTTAAAGGAGGGTAAGGACTATCAATTAGTC ATGTAA
Upstream 100 bases:
>100_bases ATATAATTATAAACTAAAGTTATATAATTGTATATGTTGTAATAAAGCTTTATAATTATATTGTAAAATGAATAAGAATA AATGGACAGGTGATAAATTT
Downstream 100 bases:
>100_bases TGTTTTATGAAATCATCATTTAAATTTGATTTTGATTTATCAAAAGGCGGAATAAAAATAGGAGACTTCCTTATAAGTTC AGATTCTGTATACCATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 81
Protein sequence:
>81_residues MKNYVITFENTHTSMEGESVLKEKGIKLIIIPTPTYITKSCGISIRIDEQDYEDVKKIIESKEINIKNVYLKEGKDYQLV M
Sequences:
>Translated_81_residues MKNYVITFENTHTSMEGESVLKEKGIKLIIIPTPTYITKSCGISIRIDEQDYEDVKKIIESKEINIKNVYLKEGKDYQLV M >Mature_81_residues MKNYVITFENTHTSMEGESVLKEKGIKLIIIPTPTYITKSCGISIRIDEQDYEDVKKIIESKEINIKNVYLKEGKDYQLV M
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9400; Mature: 9400
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYVITFENTHTSMEGESVLKEKGIKLIIIPTPTYITKSCGISIRIDEQDYEDVKKIIE CCCEEEEECCCCCCCCCCHHHHHCCCEEEEECCCCEEECCCCEEEEECCCCHHHHHHHHC SKEINIKNVYLKEGKDYQLVM CCCCCEEEEEEECCCEEEEEC >Mature Secondary Structure MKNYVITFENTHTSMEGESVLKEKGIKLIIIPTPTYITKSCGISIRIDEQDYEDVKKIIE CCCEEEEECCCCCCCCCCHHHHHCCCEEEEECCCCEEECCCCEEEEECCCCHHHHHHHHC SKEINIKNVYLKEGKDYQLVM CCCCCEEEEEEECCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA