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The map label for this gene is noc [H]

Identifier: 170754545

GI number: 170754545

Start: 3950722

End: 3951501

Strand: Reverse

Name: noc [H]

Synonym: CLD_0834

Alternate gene names: 170754545

Gene position: 3951501-3950722 (Counterclockwise)

Preceding gene: 170754945

Following gene: 170755411

Centisome position: 99.83

GC content: 27.05

Gene sequence:

>780_bases
ATGCAAAAAAATATAAATTATATTTCCACTGATAAAATTATTCCCAATTTATATCAACCTAGAAAATATTTTAATGAGGA
AAGTATAGAAGAGCTAGCGCAATCAATAAAAGTGTATGGTATAATTCAGCCATTATCTGTTAGAGAGATAAAAGATGGCG
AATATGAATTAGTTGCTGGGGAAAGAAGATTAAGGGCAGCTAAAAAATTGGGTTTAAATGAAGTTCCGGCAGTTATTATA
GATGTTACAGATAAGGATTCCGCAGCAATAGCCTTGTTAGAAAATTTACAAAGAGAAGATTTAAATTGTTTTGAGGAAGC
AGAAGCTTATCATAATTTAATACAAGAACATTTTTACACTCAAGATAAATTATCTGAAGTAATTGGGAAAAAGCAATCTA
CTATAGCAAATAAAATGAGGTTATTAAAATTATCTAAAGAAGTTAGGGAAAAAATATTAGAAAATAATTTAACAGAAAGG
CATGGCAGGGCGCTGTTAAAAATTAATGATAAAGATAAACAATTAAAAATATTGGCTATTGTTATAGAAAAAAAATTAAA
TGTCAAAAGTACAGAAGAATTAATAGAAAAGGAATTATGTGATGATAGCAATAAAAATTTAGCTTCTGATGGTAAAAAAA
GAATAAAAGGAATTTTTTCACCGGTAGTTTATGTTAATACAGTAAAACAGGTTTTTGATAAGTATGGCGTTAAGGCAAAT
TACAGATCTAAAGATCTAGATGATAAAATACAAATAACAATAACAATACCTAAAAAATAG

Upstream 100 bases:

>100_bases
AATGTAATAATTTGCAATTAAAAAAATAATAAAAAAAGAAGGAAAATTACATTTAAAGAAGAAATGTAAATATTAGGAAG
AGAATAAGAGGGATGGTAGT

Downstream 100 bases:

>100_bases
TAGATGTTTCACGTGAAACATCTATTTTTTATTAAATTTTAATAAAGTATATGTAAAAGACTTTAATTATTTTACTTTAA
ATTATATAATTAAAAGTAGA

Product: parB family protein

Products: NA

Alternate protein names: Noc [H]

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAGERRLRAAKKLGLNEVPAVII
DVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTER
HGRALLKINDKDKQLKILAIVIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
YRSKDLDDKIQITITIPKK

Sequences:

>Translated_259_residues
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAGERRLRAAKKLGLNEVPAVII
DVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTER
HGRALLKINDKDKQLKILAIVIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
YRSKDLDDKIQITITIPKK
>Mature_259_residues
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAGERRLRAAKKLGLNEVPAVII
DVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYTQDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTER
HGRALLKINDKDKQLKILAIVIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
YRSKDLDDKIQITITIPKK

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 29818; Mature: 29818

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAG
CCCCCCEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEHH
ERRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYT
HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTERHGRALLKINDKDKQLKILAI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCEEEHHE
VIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
EHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YRSKDLDDKIQITITIPKK
CCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MQKNINYISTDKIIPNLYQPRKYFNEESIEELAQSIKVYGIIQPLSVREIKDGEYELVAG
CCCCCCEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEHH
ERRLRAAKKLGLNEVPAVIIDVTDKDSAAIALLENLQREDLNCFEEAEAYHNLIQEHFYT
HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QDKLSEVIGKKQSTIANKMRLLKLSKEVREKILENNLTERHGRALLKINDKDKQLKILAI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCEEEHHE
VIEKKLNVKSTEELIEKELCDDSNKNLASDGKKRIKGIFSPVVYVNTVKQVFDKYGVKAN
EHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YRSKDLDDKIQITITIPKK
CCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA