| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
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The map label for this gene is 170754438
Identifier: 170754438
GI number: 170754438
Start: 2023731
End: 2024219
Strand: Reverse
Name: 170754438
Synonym: CLD_2737
Alternate gene names: NA
Gene position: 2024219-2023731 (Counterclockwise)
Preceding gene: 170755207
Following gene: 170757837
Centisome position: 51.14
GC content: 19.84
Gene sequence:
>489_bases TTGAAAAAATTGAATATATATAGAATTGTTTTTATAATAAGTTTATTAATACTTCCAATTATTATATTATTTAATATGAA TTTAAATAATAAGGTTAGCTTGGTACAGGAAGAAAGAAATAAATTGCAGTTAAGTTTTCAAAATAGTAAAAGTATTAAAA GTATAGATTGTACTTATATTTTAGAAAAATTAAGTGAGAATCCTTACGTAAGTGTTAAAAAGATAGAAAATGAAAAAAAT AATATATACGTAAGTTTAAATTACTATGGAGACAAGGAAGAATTAAAAAAATTTTTAAGTAGTGTGAATTCTTCAAAAAA CTTTAAAAGTATTAAGAATTTAAGTATGAACACCAAGAAAATAGAAAATAACAATAATGGAAATCATAACAGATATGATA ATGAAAGTGATGAAAAAATCAATAATAATAGTGACAATAATGAGGAAGAAAAACAGATAGATATTACATTACAATATGCA AAAAATTAA
Upstream 100 bases:
>100_bases ATTTATTAGAAAAAAATAAAAAAATAAATATTAAAAATTTAGATGCACCAGAAAAAGAAGAAGATTTTTATAAATTTAAA TTTATTTTGGAGTGATAAAA
Downstream 100 bases:
>100_bases ATTAATAAAGTAAAAATCAATTCAAAAATAATTTTTAGTAAATCTGAGATTTGTTTAATATTATATAATTATAATAAACT ATTGTTACATAAGTATTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKKLNIYRIVFIISLLILPIIILFNMNLNNKVSLVQEERNKLQLSFQNSKSIKSIDCTYILEKLSENPYVSVKKIENEKN NIYVSLNYYGDKEELKKFLSSVNSSKNFKSIKNLSMNTKKIENNNNGNHNRYDNESDEKINNNSDNNEEEKQIDITLQYA KN
Sequences:
>Translated_162_residues MKKLNIYRIVFIISLLILPIIILFNMNLNNKVSLVQEERNKLQLSFQNSKSIKSIDCTYILEKLSENPYVSVKKIENEKN NIYVSLNYYGDKEELKKFLSSVNSSKNFKSIKNLSMNTKKIENNNNGNHNRYDNESDEKINNNSDNNEEEKQIDITLQYA KN >Mature_162_residues MKKLNIYRIVFIISLLILPIIILFNMNLNNKVSLVQEERNKLQLSFQNSKSIKSIDCTYILEKLSENPYVSVKKIENEKN NIYVSLNYYGDKEELKKFLSSVNSSKNFKSIKNLSMNTKKIENNNNGNHNRYDNESDEKINNNSDNNEEEKQIDITLQYA KN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19006; Mature: 19006
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLNIYRIVFIISLLILPIIILFNMNLNNKVSLVQEERNKLQLSFQNSKSIKSIDCTYI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHH LEKLSENPYVSVKKIENEKNNIYVSLNYYGDKEELKKFLSSVNSSKNFKSIKNLSMNTKK HHHHCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCC IENNNNGNHNRYDNESDEKINNNSDNNEEEKQIDITLQYAKN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure MKKLNIYRIVFIISLLILPIIILFNMNLNNKVSLVQEERNKLQLSFQNSKSIKSIDCTYI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEEECCCCCCCHHHHHHH LEKLSENPYVSVKKIENEKNNIYVSLNYYGDKEELKKFLSSVNSSKNFKSIKNLSMNTKK HHHHCCCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCC IENNNNGNHNRYDNESDEKINNNSDNNEEEKQIDITLQYAKN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA