| Definition | Clostridium botulinum B1 str. Okra, complete genome. |
|---|---|
| Accession | NC_010516 |
| Length | 3,958,233 |
Click here to switch to the map view.
The map label for this gene is wecB [C]
Identifier: 170754425
GI number: 170754425
Start: 3345598
End: 3346656
Strand: Reverse
Name: wecB [C]
Synonym: CLD_1440
Alternate gene names: 170754425
Gene position: 3346656-3345598 (Counterclockwise)
Preceding gene: 170757348
Following gene: 170755005
Centisome position: 84.55
GC content: 28.9
Gene sequence:
>1059_bases ATGAAGATATTAACAGTAGTTGGTGCACGTCCACAATTTATAAAAGCAGCAGCAGTTTCAAATATAATAAGAAAAGAGCA TGAAGAAATATTAGTTCATACTGGTCAACATTATGATGAAAATATGTCTAAAATATTTTTTGAAGAGTTAAGAATACCTA AGCCAGATTATAATTTAGAAATAGGTTCAGGTAATCATGGTGAACAGACAGGTAAAATGCTTATAGAATTAGAAAAAATA TATTTAAAAGAAAAGCCAGATTTAGTATTAGTCTATGGGGATACAAATTCTACCTTAGCAGGAGCTTTGTGTGCAAGTAA ACTGTTAATACCTGTAGCTCATGTAGAAGCTGGTCTTAGAAGCTTTAATATGAATATGCCAGAAGAACAAAATAGAATTC TTACAGATCATATATCAAAGTTATTATTTGTACCTACAGTTACAGCAGAAAAAAATCTTCATACTGAGGGAGTTAATAAC GGTGTTCATAATGTAGGAGATGTAATGTTTGATGCTGTATTACATTTCAAGAAATTAGCAGAAGAGAAGGAAAGTATACT AGATAAAATCTCTGTAAAATCTGGAGAATATATTTTAACAACAATACATAGAGCAGAAAACACTAATGATATAAATAGAT TGAAAAATATAATAGAGGCATTAAATGAAAGTGGAAAGTCAATAGTATTACCACTTCATCCAAGAACTAAAAAATATATG GAAGATTATAATTTACAATTTAATGATAATATAAAATTAATAGAGCCAGTAGGATATCTTGATATGATTACTTTAGAAAT GAATTCACAAAAGATAGTTACTGATAGTGGTGGAGTTCAAAAAGAAGCTTTCTTTATGGAAAAACCTTGTGTTACTATGA GAGATGAAACAGAGTGGGTAGAGACCGTAGAAAATGGATGGAATGTAATAGTAGGTACAAATAAAGAAAAAATATTAAAT GCTATAATAAATTTTAAGCCTGAAAAAGAACAGCAAGAAATATTCGGAAATGGTCATGCAGCGGAAAAAATATTAGATAT AATAAACGAAATGAAGTAA
Upstream 100 bases:
>100_bases AGACAGGAAGAAAGTTTGTGGAAGATAATTTTAATATAGAAGATAATTTTAATAATGTAGATATAATATACAAATCTATA ATAGATGGAGGAGATAATTA
Downstream 100 bases:
>100_bases TTATTTTGAGGTGATAATATGAAAATCCTATTTTTGACTCAATACTGTCCACCTGAAGTTGGAGCACCTCAAAACAGAAT TTTTGAGTTTGCAAAGCAAC
Product: UDP-N-acetylglucosamine 2-epimerase
Products: UDP-N-acetyl-D-mannosamine
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKILTVVGARPQFIKAAAVSNIIRKEHEEILVHTGQHYDENMSKIFFEELRIPKPDYNLEIGSGNHGEQTGKMLIELEKI YLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLRSFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNN GVHNVGDVMFDAVLHFKKLAEEKESILDKISVKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYM EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWVETVENGWNVIVGTNKEKILN AIINFKPEKEQQEIFGNGHAAEKILDIINEMK
Sequences:
>Translated_352_residues MKILTVVGARPQFIKAAAVSNIIRKEHEEILVHTGQHYDENMSKIFFEELRIPKPDYNLEIGSGNHGEQTGKMLIELEKI YLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLRSFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNN GVHNVGDVMFDAVLHFKKLAEEKESILDKISVKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYM EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWVETVENGWNVIVGTNKEKILN AIINFKPEKEQQEIFGNGHAAEKILDIINEMK >Mature_352_residues MKILTVVGARPQFIKAAAVSNIIRKEHEEILVHTGQHYDENMSKIFFEELRIPKPDYNLEIGSGNHGEQTGKMLIELEKI YLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLRSFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNN GVHNVGDVMFDAVLHFKKLAEEKESILDKISVKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYM EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWVETVENGWNVIVGTNKEKILN AIINFKPEKEQQEIFGNGHAAEKILDIINEMK
Specific function: Catalyzes The Reversible Epimerization At C-2 Of UDP-N- Acetylglucosamine (UDP-Glcnac) And Thereby Provides Bacteria With UDP-N-Acetylmannosamine (UDP-Mannac), The Activated Donor Of Mannac Residues. Also Involved In Bacteriophage N4 Adsorption. [C]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=377, Percent_Identity=33.9522546419098, Blast_Score=147, Evalue=8e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: 5.1.3.14
Molecular weight: Translated: 39865; Mature: 39865
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILTVVGARPQFIKAAAVSNIIRKEHEEILVHTGQHYDENMSKIFFEELRIPKPDYNLE CEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCCEEE IGSGNHGEQTGKMLIELEKIYLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLR ECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH SFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNNGVHNVGDVMFDAVLHFKKLA HCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EEKESILDKISVKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYM HHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWV HHCCCEECCCEEEECCCCCEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCCCCCCHHHH ETVENGWNVIVGTNKEKILNAIINFKPEKEQQEIFGNGHAAEKILDIINEMK HHHHCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKILTVVGARPQFIKAAAVSNIIRKEHEEILVHTGQHYDENMSKIFFEELRIPKPDYNLE CEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCCCCCEEE IGSGNHGEQTGKMLIELEKIYLKEKPDLVLVYGDTNSTLAGALCASKLLIPVAHVEAGLR ECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH SFNMNMPEEQNRILTDHISKLLFVPTVTAEKNLHTEGVNNGVHNVGDVMFDAVLHFKKLA HCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH EEKESILDKISVKSGEYILTTIHRAENTNDINRLKNIIEALNESGKSIVLPLHPRTKKYM HHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHH EDYNLQFNDNIKLIEPVGYLDMITLEMNSQKIVTDSGGVQKEAFFMEKPCVTMRDETEWV HHCCCEECCCEEEECCCCCEEEEEEEECCCEEEECCCCCCHHHHHHCCCCCCCCCCHHHH ETVENGWNVIVGTNKEKILNAIINFKPEKEQQEIFGNGHAAEKILDIINEMK HHHHCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: UDP-N-acetylglucosamine [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.63 {UDP-N-acetylglucosamine}} 1 {UDP-N-acetylmannosamine}} 0.5 {UDP-N-acetylmannosamine}} [C]
Substrates: UDP-N-acetyl-D-glucosamine
Specific reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine
General reaction: Epimerization [C]
Inhibitor: PCMB [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA