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The map label for this gene is yjcH [H]

Identifier: 170751965

GI number: 170751965

Start: 5924777

End: 5925148

Strand: Reverse

Name: yjcH [H]

Synonym: Mrad2831_5597

Alternate gene names: 170751965

Gene position: 5925148-5924777 (Counterclockwise)

Preceding gene: 170751966

Following gene: 170751964

Centisome position: 97.49

GC content: 67.47

Gene sequence:

>372_bases
ATGAGCGGCACGACACTGAACACCCGAGGGCGCACGGCGCCCCCGGGAACACGCCCACGCGAGATCGCCGTCGATCCGCA
GGTGGCGCGGATCTCACGGACTCCCGAGTTCCAGCAGCTCGTTCACGAGCGCACCCGCTTCGCGTGGATCCTGACGATCC
TGATGCTGGTGGTCTATTTCGGCTTCATCGGGCTGATCGCCTTCGACAAGTCGCTCCTCGCCGTGAAGGTCGGCGGCACC
GCCTCCCTCGGCCTGTTCGCGGGCGTGTTCGTGATCCTGTTCGCCTTCGCGCTCACGGGGGTCTACGTCGCCCGGGCCAA
CACGCGCTTCGACGCGCTGAGCGAAGCCCTGAAGCGGAGCGTGGCCCGATGA

Upstream 100 bases:

>100_bases
CGGGGCGGGTGCCGGGGCGGCGCCCGCCTCCAACAAGAACCACGAATCCCAACGCGCAGAACCGGGGGGCCGCGAGCGTG
CCCTCGCGGGAGGAACACCC

Downstream 100 bases:

>100_bases
ACCGCCTCCTTCTCGGCCTGACGCTCGCCACGATCGTCGCGAGCGCCGCCTACGCGGCCGGCCCGGATCTCGGCGCCGTC
GCGCAATCGGCCACGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSGTTLNTRGRTAPPGTRPREIAVDPQVARISRTPEFQQLVHERTRFAWILTILMLVVYFGFIGLIAFDKSLLAVKVGGT
ASLGLFAGVFVILFAFALTGVYVARANTRFDALSEALKRSVAR

Sequences:

>Translated_123_residues
MSGTTLNTRGRTAPPGTRPREIAVDPQVARISRTPEFQQLVHERTRFAWILTILMLVVYFGFIGLIAFDKSLLAVKVGGT
ASLGLFAGVFVILFAFALTGVYVARANTRFDALSEALKRSVAR
>Mature_122_residues
SGTTLNTRGRTAPPGTRPREIAVDPQVARISRTPEFQQLVHERTRFAWILTILMLVVYFGFIGLIAFDKSLLAVKVGGTA
SLGLFAGVFVILFAFALTGVYVARANTRFDALSEALKRSVAR

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790504, Length=94, Percent_Identity=44.6808510638298, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 13458; Mature: 13327

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGTTLNTRGRTAPPGTRPREIAVDPQVARISRTPEFQQLVHERTRFAWILTILMLVVYF
CCCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GFIGLIAFDKSLLAVKVGGTASLGLFAGVFVILFAFALTGVYVARANTRFDALSEALKRS
HHHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VAR
HCC
>Mature Secondary Structure 
SGTTLNTRGRTAPPGTRPREIAVDPQVARISRTPEFQQLVHERTRFAWILTILMLVVYF
CCCCCCCCCCCCCCCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GFIGLIAFDKSLLAVKVGGTASLGLFAGVFVILFAFALTGVYVARANTRFDALSEALKRS
HHHHHHHHCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VAR
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]