| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is actP [H]
Identifier: 170751964
GI number: 170751964
Start: 5923098
End: 5924780
Strand: Reverse
Name: actP [H]
Synonym: Mrad2831_5596
Alternate gene names: 170751964
Gene position: 5924780-5923098 (Counterclockwise)
Preceding gene: 170751965
Following gene: 170751963
Centisome position: 97.48
GC content: 67.74
Gene sequence:
>1683_bases ATGAACCGCCTCCTTCTCGGCCTGACGCTCGCCACGATCGTCGCGAGCGCCGCCTACGCGGCCGGCCCGGATCTCGGCGC CGTCGCGCAATCGGCCACGAACTGGCCGGCCATCCTGATGTTCCTGTTCTTCGTGCTGCTGACGCTCGGCATCACCTACC GGGCCGCCAAGGGCACCAAGTCTGCCGCCGACTTCTACGCGGCGGGCGGCGGCATCTCGGCAGGGACGAACTCCCTGGCG ATCGCCGGCGACTACATGTCGGCGGCCTCGTTCCTCGGCATCTCCGGCCTCGTCTACACCTCGGGCTTCGACGGGCTGAT CTACTCGACGGGCTTCCTGGTCGGCTGGCCCATCGTGCTGTTCCTGATCGCGGAGCGCCTGCGCAACCTCGGCAAGTTCA CCTTCGCCGACGTGGCGAGCTTCCGCCTCGACCAGACCGCGATCCGCATCATCTCGGCGGTGGGCACCCTGGTGGTGGTG GCCTTCTACCTGATCGCCCAGATGGTCGGCGCGGGGAAGTTGATCCAGCTCCTGTTCGGCCTGCCCTACCTCTACGCGGT GATCATCGTCGGCGTCCTGATGATCGTCTACGTCGCCTTCGGCGGCATGAAGGCGACCACCTGGGTGCAGGTGATCAAGG CCTGCCTGCTGCTCGGCGGCGCGACCTTCATGGCCGGCGCGGTGCTGCTGAAGTACGGCTTCAACCCGGAAATGCTGTTC GCCAGCGCCGTTCAGGTCCACCCGAAGGGCGACGCCATCATGGCGCCGGGAGGCCTCGTGTCGAACCCGGTCGAGGCGAT CTCGCTCGGCGTCGGCCTGATGTTCGGCACCGCCGGCCTGCCGCACATCCTGATGCGGTTCTTCACGGTCTCGGACGCCC AGGCCGCCCGCAAGTCGGTGTTCTACGCCACCGGCCTGATCGGCTACTTCTACATTTTGACCTTCATCATCGGCTTCGGC GGCATCGCGCTGCTGATGTCGGACCCGGTCTACTTCAAGCTCGGTCCGGCCGGCGCGTTCGACAAGCTGAAGGACATGAT CGGCGGCACCAACATGGTGGCGGTGAACCTCGCCAACGCGGTGGGCGGCCCGTACTTCCTGGGCTTCATCTCCGCCGTGG CCTTCGCCACGATCCTCGCGGTCGTCGCCGGCCTGACGCTCGCCGGCGCTTCGGCGATCAGTCACGACCTCTACGCCCAG GTGATCGCCCGCGGGCGGACCACCGAGAAGCACGAGGTCAACCTGTCGAAGATCTCGGCCGTGGTGATCGGCATCGTGGC GATCTACCTCGGCTACGTGTTCGAGAACCAGAACGTCGCCTTCATGGTCGGCCTCGCCTTCGCGGTGGCGGCGAGCTGCA ATTTCCCGGTGCTCGCCATGTCGATCCTGTGGCGGGGCACCACCACCTGGGGCGCGCTCGCCGGCGGCCTCGTCGGCCTG CTCGCGGCGGTCATCATGGTGGTGCTGTCGAAGGCCGTGTGGGTGACGACGCTGGGCAACCCCGCCCCGCTCTTCCCCTA CGACAACCCGGCGCTGTTCTCGATGCCGCTGGCCTTCGCGACGATCTGGGTCGTATCCCTCTTGGACAAGACCCGGCGCG CGCAGCGCGAGCGGGCCGCCTTCGAGGCCCAGTACGTGCGTTCCGAGACGGGCATCGGGGCCGCCGGCGCGCACGCGCAC TGA
Upstream 100 bases:
>100_bases TCGTGATCCTGTTCGCCTTCGCGCTCACGGGGGTCTACGTCGCCCGGGCCAACACGCGCTTCGACGCGCTGAGCGAAGCC CTGAAGCGGAGCGTGGCCCG
Downstream 100 bases:
>100_bases CGACGATCCGACGGGTCTGACAGGCGGAGGGCGCGGCGCGAGCCGCGCCCTTCGTCGTTCCGGTGACAACTCGGTACGCG CCCATGTTGATGAGGGTCTT
Product: SSS family solute/sodium (Na+) symporter
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MNRLLLGLTLATIVASAAYAAGPDLGAVAQSATNWPAILMFLFFVLLTLGITYRAAKGTKSAADFYAAGGGISAGTNSLA IAGDYMSAASFLGISGLVYTSGFDGLIYSTGFLVGWPIVLFLIAERLRNLGKFTFADVASFRLDQTAIRIISAVGTLVVV AFYLIAQMVGAGKLIQLLFGLPYLYAVIIVGVLMIVYVAFGGMKATTWVQVIKACLLLGGATFMAGAVLLKYGFNPEMLF ASAVQVHPKGDAIMAPGGLVSNPVEAISLGVGLMFGTAGLPHILMRFFTVSDAQAARKSVFYATGLIGYFYILTFIIGFG GIALLMSDPVYFKLGPAGAFDKLKDMIGGTNMVAVNLANAVGGPYFLGFISAVAFATILAVVAGLTLAGASAISHDLYAQ VIARGRTTEKHEVNLSKISAVVIGIVAIYLGYVFENQNVAFMVGLAFAVAASCNFPVLAMSILWRGTTTWGALAGGLVGL LAAVIMVVLSKAVWVTTLGNPAPLFPYDNPALFSMPLAFATIWVVSLLDKTRRAQRERAAFEAQYVRSETGIGAAGAHAH
Sequences:
>Translated_560_residues MNRLLLGLTLATIVASAAYAAGPDLGAVAQSATNWPAILMFLFFVLLTLGITYRAAKGTKSAADFYAAGGGISAGTNSLA IAGDYMSAASFLGISGLVYTSGFDGLIYSTGFLVGWPIVLFLIAERLRNLGKFTFADVASFRLDQTAIRIISAVGTLVVV AFYLIAQMVGAGKLIQLLFGLPYLYAVIIVGVLMIVYVAFGGMKATTWVQVIKACLLLGGATFMAGAVLLKYGFNPEMLF ASAVQVHPKGDAIMAPGGLVSNPVEAISLGVGLMFGTAGLPHILMRFFTVSDAQAARKSVFYATGLIGYFYILTFIIGFG GIALLMSDPVYFKLGPAGAFDKLKDMIGGTNMVAVNLANAVGGPYFLGFISAVAFATILAVVAGLTLAGASAISHDLYAQ VIARGRTTEKHEVNLSKISAVVIGIVAIYLGYVFENQNVAFMVGLAFAVAASCNFPVLAMSILWRGTTTWGALAGGLVGL LAAVIMVVLSKAVWVTTLGNPAPLFPYDNPALFSMPLAFATIWVVSLLDKTRRAQRERAAFEAQYVRSETGIGAAGAHAH >Mature_560_residues MNRLLLGLTLATIVASAAYAAGPDLGAVAQSATNWPAILMFLFFVLLTLGITYRAAKGTKSAADFYAAGGGISAGTNSLA IAGDYMSAASFLGISGLVYTSGFDGLIYSTGFLVGWPIVLFLIAERLRNLGKFTFADVASFRLDQTAIRIISAVGTLVVV AFYLIAQMVGAGKLIQLLFGLPYLYAVIIVGVLMIVYVAFGGMKATTWVQVIKACLLLGGATFMAGAVLLKYGFNPEMLF ASAVQVHPKGDAIMAPGGLVSNPVEAISLGVGLMFGTAGLPHILMRFFTVSDAQAARKSVFYATGLIGYFYILTFIIGFG GIALLMSDPVYFKLGPAGAFDKLKDMIGGTNMVAVNLANAVGGPYFLGFISAVAFATILAVVAGLTLAGASAISHDLYAQ VIARGRTTEKHEVNLSKISAVVIGIVAIYLGYVFENQNVAFMVGLAFAVAASCNFPVLAMSILWRGTTTWGALAGGLVGL LAAVIMVVLSKAVWVTTLGNPAPLFPYDNPALFSMPLAFATIWVVSLLDKTRRAQRERAAFEAQYVRSETGIGAAGAHAH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=475, Percent_Identity=22.7368421052632, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1790503, Length=560, Percent_Identity=63.2142857142857, Blast_Score=679, Evalue=0.0, Organism=Escherichia coli, GI1787251, Length=464, Percent_Identity=26.0775862068966, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI87082237, Length=364, Percent_Identity=24.1758241758242, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 58621; Mature: 58621
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLLLGLTLATIVASAAYAAGPDLGAVAQSATNWPAILMFLFFVLLTLGITYRAAKGTK CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEECCCCC SAADFYAAGGGISAGTNSLAIAGDYMSAASFLGISGLVYTSGFDGLIYSTGFLVGWPIVL HHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHH FLIAERLRNLGKFTFADVASFRLDQTAIRIISAVGTLVVVAFYLIAQMVGAGKLIQLLFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LPYLYAVIIVGVLMIVYVAFGGMKATTWVQVIKACLLLGGATFMAGAVLLKYGFNPEMLF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH ASAVQVHPKGDAIMAPGGLVSNPVEAISLGVGLMFGTAGLPHILMRFFTVSDAQAARKSV HHHHEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH FYATGLIGYFYILTFIIGFGGIALLMSDPVYFKLGPAGAFDKLKDMIGGTNMVAVNLANA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEHHH VGGPYFLGFISAVAFATILAVVAGLTLAGASAISHDLYAQVIARGRTTEKHEVNLSKISA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHH VVIGIVAIYLGYVFENQNVAFMVGLAFAVAASCNFPVLAMSILWRGTTTWGALAGGLVGL HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHH LAAVIMVVLSKAVWVTTLGNPAPLFPYDNPALFSMPLAFATIWVVSLLDKTRRAQRERAA HHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAQYVRSETGIGAAGAHAH HHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNRLLLGLTLATIVASAAYAAGPDLGAVAQSATNWPAILMFLFFVLLTLGITYRAAKGTK CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEECCCCC SAADFYAAGGGISAGTNSLAIAGDYMSAASFLGISGLVYTSGFDGLIYSTGFLVGWPIVL HHHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCHHEEECCCCCHHHHHHHHHHHHHHH FLIAERLRNLGKFTFADVASFRLDQTAIRIISAVGTLVVVAFYLIAQMVGAGKLIQLLFG HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LPYLYAVIIVGVLMIVYVAFGGMKATTWVQVIKACLLLGGATFMAGAVLLKYGFNPEMLF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH ASAVQVHPKGDAIMAPGGLVSNPVEAISLGVGLMFGTAGLPHILMRFFTVSDAQAARKSV HHHHEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH FYATGLIGYFYILTFIIGFGGIALLMSDPVYFKLGPAGAFDKLKDMIGGTNMVAVNLANA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEHHH VGGPYFLGFISAVAFATILAVVAGLTLAGASAISHDLYAQVIARGRTTEKHEVNLSKISA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHH VVIGIVAIYLGYVFENQNVAFMVGLAFAVAASCNFPVLAMSILWRGTTTWGALAGGLVGL HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHH LAAVIMVVLSKAVWVTTLGNPAPLFPYDNPALFSMPLAFATIWVVSLLDKTRRAQRERAA HHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEAQYVRSETGIGAAGAHAH HHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA