Click here to switch to the map view.

The map label for this gene is 170751803

Identifier: 170751803

GI number: 170751803

Start: 5740784

End: 5741482

Strand: Reverse

Name: 170751803

Synonym: Mrad2831_5433

Alternate gene names: NA

Gene position: 5741482-5740784 (Counterclockwise)

Preceding gene: 170751805

Following gene: 170751802

Centisome position: 94.47

GC content: 77.83

Gene sequence:

>699_bases
ATGCTGGCCCTGTCGGCCGCCTGCGCGCTGCCGGCGCGGGCGGCGGAGATGCGCATCGAGGCCGCCAAGATCACCGGCGG
CGACCTCTGGATCATCGGCTACGCCGACGATCCGGGGGTGGAAATCACGCTCGACGGCCAGTTCCCGCACAGGACCGACA
GCCGCGGCTATTTCGAGTTCCGCGTCGTCTACCATCCGGCCACCTGCATCGCGACTCTGCGGACGCCGAAGCAGAGCCGC
AGCATCGTGGTCGGCGAGTGCGGCCAGCAGGGGCCGCAGGGGCCGCAGGCGCCGGGTCTGGTCGGCCCGCGCGGCGAGGC
CGGTCCGCGGGGCGAGGCCGGGCCGCCCGGGGAGCGGGGCGCGATGGGACCGCCCGGACCGCAGGGGCCCGCCGGCGCAC
AGGGTGTCGCCGGACCGCCGGGTCCGCCGGGCGAGCGCGGCCCCGCCGGAATGGCCGGCGCTCCGGGGCTGATGGGCGCC
ACGGGTCCGGCCGGCCCGCCCGGGCCGCCCGGCTCCCGCGGACAGCCGGCTTCCCCGAGCGCAGCCCCGAAGCCGAAACC
GTCGGAAGCGCTGACAGGGTCGGTGCCCAGACCGCGTCCGCCGGCGCGCGCGCGCCGTGCGCCCGAATCCGACTCAGGCC
CCGAGGGCCCGCTGGAGCTGGAGCCCGACGCCGGGGGCGGCGGAATGGACCGGTACTAG

Upstream 100 bases:

>100_bases
CTAGTTTGCGGGCTATGGCATTCTGACTGTCGAAAAGACTGTGTGACCTGCCATGAGATCTGCCAGGCGCCTGTGGCGCG
AGCGCTGGGCGCTCTGTTCG

Downstream 100 bases:

>100_bases
GCGGGCGCCGGTGCCGTCGGCGGAGTCGAACGGTCGCGGACGGACCGCCCCCTCCCCTGCCGGCGCTCGGTCAGCTCCGA
GTTCTCGCGCCTCCGCATGC

Product: triple helix repeat-containing collagen

Products: NA

Alternate protein names: Collagen Triple Helix Repeat-Containing Protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MLALSAACALPARAAEMRIEAAKITGGDLWIIGYADDPGVEITLDGQFPHRTDSRGYFEFRVVYHPATCIATLRTPKQSR
SIVVGECGQQGPQGPQAPGLVGPRGEAGPRGEAGPPGERGAMGPPGPQGPAGAQGVAGPPGPPGERGPAGMAGAPGLMGA
TGPAGPPGPPGSRGQPASPSAAPKPKPSEALTGSVPRPRPPARARRAPESDSGPEGPLELEPDAGGGGMDRY

Sequences:

>Translated_232_residues
MLALSAACALPARAAEMRIEAAKITGGDLWIIGYADDPGVEITLDGQFPHRTDSRGYFEFRVVYHPATCIATLRTPKQSR
SIVVGECGQQGPQGPQAPGLVGPRGEAGPRGEAGPPGERGAMGPPGPQGPAGAQGVAGPPGPPGERGPAGMAGAPGLMGA
TGPAGPPGPPGSRGQPASPSAAPKPKPSEALTGSVPRPRPPARARRAPESDSGPEGPLELEPDAGGGGMDRY
>Mature_232_residues
MLALSAACALPARAAEMRIEAAKITGGDLWIIGYADDPGVEITLDGQFPHRTDSRGYFEFRVVYHPATCIATLRTPKQSR
SIVVGECGQQGPQGPQAPGLVGPRGEAGPRGEAGPPGERGAMGPPGPQGPAGAQGVAGPPGPPGERGPAGMAGAPGLMGA
TGPAGPPGPPGSRGQPASPSAAPKPKPSEALTGSVPRPRPPARARRAPESDSGPEGPLELEPDAGGGGMDRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI183583553, Length=99, Percent_Identity=46.4646464646465, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI56847616, Length=93, Percent_Identity=50.5376344086022, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI156616290, Length=160, Percent_Identity=32.5, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI65301115, Length=93, Percent_Identity=50.5376344086022, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23084; Mature: 23084

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALSAACALPARAAEMRIEAAKITGGDLWIIGYADDPGVEITLDGQFPHRTDSRGYFEF
CCCCCCHHHCCHHHHHEEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEE
RVVYHPATCIATLRTPKQSRSIVVGECGQQGPQGPQAPGLVGPRGEAGPRGEAGPPGERG
EEEECCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AMGPPGPQGPAGAQGVAGPPGPPGERGPAGMAGAPGLMGATGPAGPPGPPGSRGQPASPS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPKPKPSEALTGSVPRPRPPARARRAPESDSGPEGPLELEPDAGGGGMDRY
CCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure
MLALSAACALPARAAEMRIEAAKITGGDLWIIGYADDPGVEITLDGQFPHRTDSRGYFEF
CCCCCCHHHCCHHHHHEEEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCEEEE
RVVYHPATCIATLRTPKQSRSIVVGECGQQGPQGPQAPGLVGPRGEAGPRGEAGPPGERG
EEEECCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AMGPPGPQGPAGAQGVAGPPGPPGERGPAGMAGAPGLMGATGPAGPPGPPGSRGQPASPS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPKPKPSEALTGSVPRPRPPARARRAPESDSGPEGPLELEPDAGGGGMDRY
CCCCCCCCHHCCCCCCCCCCCHHHHCCCCCCCCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA