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The map label for this gene is omp31 [H]

Identifier: 170751779

GI number: 170751779

Start: 5714053

End: 5714892

Strand: Reverse

Name: omp31 [H]

Synonym: Mrad2831_5409

Alternate gene names: 170751779

Gene position: 5714892-5714053 (Counterclockwise)

Preceding gene: 170751780

Following gene: 170751778

Centisome position: 94.03

GC content: 70.48

Gene sequence:

>840_bases
ATGAAATCCATGCTCCGTGTGACCACGGCCCTCGCGGGCGTCGCCTTCGCCGGCTCGGCCTTCGCGGCCGACCTGCCGCG
CCGCGCCGCCCCGCCGCCGGTGTTCACCCCCGTCCCGGTCTTCACCTGGACCGGCGCCTACTTCGGTATCAACGCCGGCT
ACGCCTTCGACGCCAGCGACCGCAACACCGGCAACACCTTCGCGGTGCCCTTCCCCTACGCCGCCCCCGGCACCGTCGCC
TCCTTCCGCAACCGCAGCCAGGACGGCTTCTCCGGCGGTGGCCAGATCGGCTACAACTGGCAGATCACCCCGGGCTCCGG
CGTCGTGATCGGCGTCGAGGCCGACGCCCAGTACCTCGACTTCGGCCGCAACCGGAACAACGCCTTCGTCTCCGGCGCCG
TCGCCCCCGGCTACTACCTCACCGACCCGCGCGGCCTCTCCAGCCTCGACTTCTTCGGCACCGTGCGCGGCCGCCTCGGC
TACGCCTTCGACCGCACCCTCGTGTACGGCACCGGCGGCTTCGCCTACGGCTCGGGCAGCGCCGACCGCTCCTTCGGCGG
CTACGCCGGCAACGACAGCTTCCGCACCGGCTGGGCCGCCGGCGGCGGCATCGAGTACGCCCTGCCCACCGACTCGTTCC
TGAACTTCTTCCGCTCCTCGGCCGTGACGCTGAAGGTCGAAGGCCTGTACGTGAACCTCGACCGCAACACCCGCAACCAG
GGCGCGTTCGTCATCAACGCCGCCAACAACTTCCCGGTCGTCTACAGCGGCGTCGGTCGCCGCGACGACCAGTTCGCCGT
CGTCCGCGCCGGTCTGAACTACAAGTTCGGCACGTTCTAG

Upstream 100 bases:

>100_bases
CGGAGCGCAAAGCAACCCTGGAACCGCTGGAACGCAGCCAGACCCGGTTCCGCAACCGTTCCCGCGACGGACGGCGCGGA
CCACCAGTGAGGACCAGATC

Downstream 100 bases:

>100_bases
GATCGCGCGGCCGCGGCCGCGCCCCACCGTCGACATGCGGGAAGCCCGGCCGGCAGGTCGGGCTTCTCGCTTTTCGGGGT
CGGCGGATGAAGTTTTCGCA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKSMLRVTTALAGVAFAGSAFAADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASDRNTGNTFAVPFPYAAPGTVA
SFRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEADAQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLG
YAFDRTLVYGTGGFAYGSGSADRSFGGYAGNDSFRTGWAAGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNTRNQ
GAFVINAANNFPVVYSGVGRRDDQFAVVRAGLNYKFGTF

Sequences:

>Translated_279_residues
MKSMLRVTTALAGVAFAGSAFAADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASDRNTGNTFAVPFPYAAPGTVA
SFRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEADAQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLG
YAFDRTLVYGTGGFAYGSGSADRSFGGYAGNDSFRTGWAAGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNTRNQ
GAFVINAANNFPVVYSGVGRRDDQFAVVRAGLNYKFGTF
>Mature_279_residues
MKSMLRVTTALAGVAFAGSAFAADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASDRNTGNTFAVPFPYAAPGTVA
SFRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEADAQYLDFGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLG
YAFDRTLVYGTGGFAYGSGSADRSFGGYAGNDSFRTGWAAGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNTRNQ
GAFVINAANNFPVVYSGVGRRDDQFAVVRAGLNYKFGTF

Specific function: Major outer membrane protein associated with peptidoglycans. May function as a porin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the omp25/ropB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017690
- InterPro:   IPR011250
- InterPro:   IPR000498 [H]

Pfam domain/function: PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 29617; Mature: 29617

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSMLRVTTALAGVAFAGSAFAADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASD
CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEECCEEEECCCCEEECCCC
RNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEADAQYLD
CCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCEECEEEEECCCCCEEEEEECCCCEEC
FGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYAFDRTLVYGTGGFAYGSGS
CCCCCCCEEEEEECCCCEEEECCCCCCCCHHHEEHHCCCCEEECCEEEEECCCEEECCCC
ADRSFGGYAGNDSFRTGWAAGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNTRNQ
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEEEEEEEEEECCCCCCC
GAFVINAANNFPVVYSGVGRRDDQFAVVRAGLNYKFGTF
CEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MKSMLRVTTALAGVAFAGSAFAADLPRRAAPPPVFTPVPVFTWTGAYFGINAGYAFDASD
CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEECCEEEECCCCEEECCCC
RNTGNTFAVPFPYAAPGTVASFRNRSQDGFSGGGQIGYNWQITPGSGVVIGVEADAQYLD
CCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCEECEEEEECCCCCEEEEEECCCCEEC
FGRNRNNAFVSGAVAPGYYLTDPRGLSSLDFFGTVRGRLGYAFDRTLVYGTGGFAYGSGS
CCCCCCCEEEEEECCCCEEEECCCCCCCCHHHEEHHCCCCEEECCEEEEECCCEEECCCC
ADRSFGGYAGNDSFRTGWAAGGGIEYALPTDSFLNFFRSSAVTLKVEGLYVNLDRNTRNQ
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCEEEEEEEEEEEEECCCCCCC
GAFVINAANNFPVVYSGVGRRDDQFAVVRAGLNYKFGTF
CEEEEECCCCCCEEEECCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8751924; 11756688 [H]