| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751778
Identifier: 170751778
GI number: 170751778
Start: 5713100
End: 5713861
Strand: Reverse
Name: 170751778
Synonym: Mrad2831_5408
Alternate gene names: NA
Gene position: 5713861-5713100 (Counterclockwise)
Preceding gene: 170751779
Following gene: 170751776
Centisome position: 94.01
GC content: 73.75
Gene sequence:
>762_bases ATGAACAGCGAAGAACGCGACGTCATTTCGGGAATCTTCCAGCGGCTGGAGCAGGCGCAGACCCAGCCCCGCGACGCGGA GGCGGAGCGCTTCATCGCCGACAAGCTCCGCGCGCAGCCCTACGCACCCTACGCGATGGCGCAGCTGATCTACGTGCAGG AAGAGGCGATCAAGAGCCTGAACCAGCAGCTGGAGCAGGCCCGCAGCCAGGCGGCCTCGGCCCAGCCCTCCGGGGGCGGC GGCTTCCTGTCGAGTATCTTCGGCGGCGGCAGCCAGCAGCGCCAGGAGCCGCAGCCCGGCTACGGGCAGCCGCGTCCGGG TGGCCAGCCCTGGGGCAACCAGGGCGGCGCGCCGCAGGGTTACCCGCAGCAAGGCTACCCGCAGCAGGGCGGCTACCCGC AGCAGCAGGGCGGCCCGTGGGGCGGCCAGCCCCAGGCCCCGGCGCGCGGCGGCGGCTTCATGGCGACGGCGCTGCCCATG GCGGCCGGCGCGGCGGGCGGCATGCTCCTCGGCAGCGCCCTGTCGAACGCCTTCGCGGGCGGCCATTCGAGCCTCGGCAG CGCCGCGGCGGCCGGCCTCGGCGGCGGTGGGGGCGAGACCATCGTCAACAACTACTACGGCGACGGCGGCAACCAGGATC TCGGCTCGGCCCTCGACAACAGCGGCAGCGACCTGGGCGGGTTCCAGGACGCCGGCTACAGCGATCCGGGCGGTGATTTC GGCGGCGACCTCGGCGGCGGCGACGACAGCGACTGGACCTGA
Upstream 100 bases:
>100_bases GTTTTCGCAATCCCCCTGACAAAGCGTCGCCGCGCACCCATGTCCTAGCTGCCATGCGGCGCGTTCGGGCCCGCGGGTGA GATTCGAGGAGGACGACTCC
Downstream 100 bases:
>100_bases TCGGCGCTGACATCGAGCGGAAGGCCCGGTCGCGTCAGGCGCGGCCGGGCCTTCTCCGTATCGGCGGGTTCGATCCGCGA CGGCGCGCGCGTCGGGCGCT
Product: putative periplasmic ligand-binding sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNSEERDVISGIFQRLEQAQTQPRDAEAERFIADKLRAQPYAPYAMAQLIYVQEEAIKSLNQQLEQARSQAASAQPSGGG GFLSSIFGGGSQQRQEPQPGYGQPRPGGQPWGNQGGAPQGYPQQGYPQQGGYPQQQGGPWGGQPQAPARGGGFMATALPM AAGAAGGMLLGSALSNAFAGGHSSLGSAAAAGLGGGGGETIVNNYYGDGGNQDLGSALDNSGSDLGGFQDAGYSDPGGDF GGDLGGGDDSDWT
Sequences:
>Translated_253_residues MNSEERDVISGIFQRLEQAQTQPRDAEAERFIADKLRAQPYAPYAMAQLIYVQEEAIKSLNQQLEQARSQAASAQPSGGG GFLSSIFGGGSQQRQEPQPGYGQPRPGGQPWGNQGGAPQGYPQQGYPQQGGYPQQQGGPWGGQPQAPARGGGFMATALPM AAGAAGGMLLGSALSNAFAGGHSSLGSAAAAGLGGGGGETIVNNYYGDGGNQDLGSALDNSGSDLGGFQDAGYSDPGGDF GGDLGGGDDSDWT >Mature_253_residues MNSEERDVISGIFQRLEQAQTQPRDAEAERFIADKLRAQPYAPYAMAQLIYVQEEAIKSLNQQLEQARSQAASAQPSGGG GFLSSIFGGGSQQRQEPQPGYGQPRPGGQPWGNQGGAPQGYPQQGYPQQGGYPQQQGGPWGGQPQAPARGGGFMATALPM AAGAAGGMLLGSALSNAFAGGHSSLGSAAAAGLGGGGGETIVNNYYGDGGNQDLGSALDNSGSDLGGFQDAGYSDPGGDF GGDLGGGDDSDWT
Specific function: Unknown
COG id: COG3416
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25620; Mature: 25620
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSEERDVISGIFQRLEQAQTQPRDAEAERFIADKLRAQPYAPYAMAQLIYVQEEAIKSL CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH NQQLEQARSQAASAQPSGGGGFLSSIFGGGSQQRQEPQPGYGQPRPGGQPWGNQGGAPQG HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YPQQGYPQQGGYPQQQGGPWGGQPQAPARGGGFMATALPMAAGAAGGMLLGSALSNAFAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC GHSSLGSAAAAGLGGGGGETIVNNYYGDGGNQDLGSALDNSGSDLGGFQDAGYSDPGGDF CCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC GGDLGGGDDSDWT CCCCCCCCCCCCC >Mature Secondary Structure MNSEERDVISGIFQRLEQAQTQPRDAEAERFIADKLRAQPYAPYAMAQLIYVQEEAIKSL CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH NQQLEQARSQAASAQPSGGGGFLSSIFGGGSQQRQEPQPGYGQPRPGGQPWGNQGGAPQG HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC YPQQGYPQQGGYPQQQGGPWGGQPQAPARGGGFMATALPMAAGAAGGMLLGSALSNAFAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC GHSSLGSAAAAGLGGGGGETIVNNYYGDGGNQDLGSALDNSGSDLGGFQDAGYSDPGGDF CCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC GGDLGGGDDSDWT CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA