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The map label for this gene is omp2b [H]

Identifier: 170751469

GI number: 170751469

Start: 5407317

End: 5408912

Strand: Direct

Name: omp2b [H]

Synonym: Mrad2831_5089

Alternate gene names: 170751469

Gene position: 5407317-5408912 (Clockwise)

Preceding gene: 170751468

Following gene: 170751470

Centisome position: 88.97

GC content: 67.92

Gene sequence:

>1596_bases
ATGCCGTTACTGAGATCATCGCTGTTGGGGTCTGCTGCCGCGTTCGCGGCCGTGGGCGCTGCACACGCCGCCGACTTGCC
GATCAGGAAGGGTGTTCCGGTCGAGTACGTCCGCGTCTGCGGCGCGTACGGCGCAGGCTTCTTCTACATTCCCGGCACCG
ATACCTGCCTTCGCATCTCCGGCCGTGCCCGGTTCGAGGGCGGATACATGACGGCGTCGACGCGGCAGGCCGGAACGAAC
GCCGGTGACAGTGCGGGCTATCAGGGCCGTCTGCGCATCAACCTCGATGCCCGCACGCAGACCGCCTACGGCACGCTGCG
CGCCTTCGTTCGCCTCGATGCCGGGTCCCGCACCGGGTACGCGCGCTCGGGGACCCAGGCCCGCATCGGGCAGGCCTACG
ACGCCACGGGCGTCGACGAGGCCGGGCACGCGCAGCAATTCATGAACGTGGACAAGGCGTTCATCCAGTTCGCCGGCCTC
ACGGCCGGTCGCGCGTCGTCGTTCTTCGACTTCTACGCCCACGACTTCGAGATCTACGGCGCGACCTCCGGCTCGGATGT
CTCCTCCACCAACCTTCTCGCCTACACGGTGACGGCCGGCTACGGCCTGTCGGCGACGCTGTCGGTCGAGGACCCGGTCT
TCCGGCGCAGCCCGATCTACGCGCCGGCCGGCACCGCGTCGCCGGCGAGCCCGGTCTTCGTCGGCTACTTCGGAGGTGCC
CCGATCGGGGTCAGCAGCATCGACAGCGTCCAGCGCGAGCGGTTGCCCGACGTCGTCGGCGTCCTGCGCGTCGATCAAGG
TTGGGGCTCGGCGCAGCTCTCCGCCGCGGTGCACGAGCTGAACGTGGGCAACATCGCGGCGACGCCCGCGCCGGGCGCCA
ATGTCAGCGTCGCGCACACCAAGAGCGTCGAGGGCTGGGCCGTGCAGGGCGGCCTGAAGATCAACGCACCCTTCGTCGCG
CTGGGGGATGCCCTCTATCTCCAGGGCGCCTACGCCGACGGGGCGCAGATGTACACGGGGTACTGCGCCTTCACCGGCTG
CTACACGCAGCTCAACAACGGCTTCCATGGCCAGAAGATCTACCAGAGCTTCTCGGACGCGACGGTCAACCCGTTCACCG
GCCAGCTGCAGACATCGCAATCCTTCTCGGCGGTCGCGTCGTTCCTGCATTACTGGACGCCGGAATGGCGCTCGGCGGTC
TTCGGCTCCTACGGAGAGCAGGATTTCTCCCGCAATGCCCGCCTCGCCCAGGGCGCGCTCTACAACGTCCTGAACTTCAA
CGGCGCCGCCAATTTCGGCTCCAACGCGGTCGGCGCGCCCGGAACGCGCTTCTACCAGTTGAGCCAAGCTCTGCGCGACA
CCTACCAGTTCGTCGCCGGCGGCAGCATCATCTGGTCGCCCGTGCGCGATCTCGATATCGGCGTCGAGGCCTTCTACACC
CAGATCGGCGTGAAGCACGGACGCGCCATCGACTCCGACAAGAGCCCCACCGCCTACGCCAACGTCGCCGGCATCAACAA
CGGCACCTTCGTCCCGCGCACCGTGACGCAGGACTCGGTCTCGCAGGTCCGCTTCCGCGTCCAGCGCGACTTCTGA

Upstream 100 bases:

>100_bases
AACAACCTAGAAGTCCGTGAGATAATCACAGATTATACTTGGAATGTCCGGTCTTGCTCATCCGTTTGCGAGATTTGAGC
TTCAAAATCCGGAGACGTCG

Downstream 100 bases:

>100_bases
TCGACGATCCCGGCGGCGGGGCCTCGGTCCCGTCGCCTGTCCCCGCGCGATGCCGTCATGGCCCGGTCGACGCCGTCATG
GCCCGGGCGACACCGGGCCA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 531; Mature: 530

Protein sequence:

>531_residues
MPLLRSSLLGSAAAFAAVGAAHAADLPIRKGVPVEYVRVCGAYGAGFFYIPGTDTCLRISGRARFEGGYMTASTRQAGTN
AGDSAGYQGRLRINLDARTQTAYGTLRAFVRLDAGSRTGYARSGTQARIGQAYDATGVDEAGHAQQFMNVDKAFIQFAGL
TAGRASSFFDFYAHDFEIYGATSGSDVSSTNLLAYTVTAGYGLSATLSVEDPVFRRSPIYAPAGTASPASPVFVGYFGGA
PIGVSSIDSVQRERLPDVVGVLRVDQGWGSAQLSAAVHELNVGNIAATPAPGANVSVAHTKSVEGWAVQGGLKINAPFVA
LGDALYLQGAYADGAQMYTGYCAFTGCYTQLNNGFHGQKIYQSFSDATVNPFTGQLQTSQSFSAVASFLHYWTPEWRSAV
FGSYGEQDFSRNARLAQGALYNVLNFNGAANFGSNAVGAPGTRFYQLSQALRDTYQFVAGGSIIWSPVRDLDIGVEAFYT
QIGVKHGRAIDSDKSPTAYANVAGINNGTFVPRTVTQDSVSQVRFRVQRDF

Sequences:

>Translated_531_residues
MPLLRSSLLGSAAAFAAVGAAHAADLPIRKGVPVEYVRVCGAYGAGFFYIPGTDTCLRISGRARFEGGYMTASTRQAGTN
AGDSAGYQGRLRINLDARTQTAYGTLRAFVRLDAGSRTGYARSGTQARIGQAYDATGVDEAGHAQQFMNVDKAFIQFAGL
TAGRASSFFDFYAHDFEIYGATSGSDVSSTNLLAYTVTAGYGLSATLSVEDPVFRRSPIYAPAGTASPASPVFVGYFGGA
PIGVSSIDSVQRERLPDVVGVLRVDQGWGSAQLSAAVHELNVGNIAATPAPGANVSVAHTKSVEGWAVQGGLKINAPFVA
LGDALYLQGAYADGAQMYTGYCAFTGCYTQLNNGFHGQKIYQSFSDATVNPFTGQLQTSQSFSAVASFLHYWTPEWRSAV
FGSYGEQDFSRNARLAQGALYNVLNFNGAANFGSNAVGAPGTRFYQLSQALRDTYQFVAGGSIIWSPVRDLDIGVEAFYT
QIGVKHGRAIDSDKSPTAYANVAGINNGTFVPRTVTQDSVSQVRFRVQRDF
>Mature_530_residues
PLLRSSLLGSAAAFAAVGAAHAADLPIRKGVPVEYVRVCGAYGAGFFYIPGTDTCLRISGRARFEGGYMTASTRQAGTNA
GDSAGYQGRLRINLDARTQTAYGTLRAFVRLDAGSRTGYARSGTQARIGQAYDATGVDEAGHAQQFMNVDKAFIQFAGLT
AGRASSFFDFYAHDFEIYGATSGSDVSSTNLLAYTVTAGYGLSATLSVEDPVFRRSPIYAPAGTASPASPVFVGYFGGAP
IGVSSIDSVQRERLPDVVGVLRVDQGWGSAQLSAAVHELNVGNIAATPAPGANVSVAHTKSVEGWAVQGGLKINAPFVAL
GDALYLQGAYADGAQMYTGYCAFTGCYTQLNNGFHGQKIYQSFSDATVNPFTGQLQTSQSFSAVASFLHYWTPEWRSAVF
GSYGEQDFSRNARLAQGALYNVLNFNGAANFGSNAVGAPGTRFYQLSQALRDTYQFVAGGSIIWSPVRDLDIGVEAFYTQ
IGVKHGRAIDSDKSPTAYANVAGINNGTFVPRTVTQDSVSQVRFRVQRDF

Specific function: Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 56261; Mature: 56130

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLRSSLLGSAAAFAAVGAAHAADLPIRKGVPVEYVRVCGAYGAGFFYIPGTDTCLRIS
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEC
GRARFEGGYMTASTRQAGTNAGDSAGYQGRLRINLDARTQTAYGTLRAFVRLDAGSRTGY
CCEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHEEEEEEECCCCCCCC
ARSGTQARIGQAYDATGVDEAGHAQQFMNVDKAFIQFAGLTAGRASSFFDFYAHDFEIYG
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEEE
ATSGSDVSSTNLLAYTVTAGYGLSATLSVEDPVFRRSPIYAPAGTASPASPVFVGYFGGA
CCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
PIGVSSIDSVQRERLPDVVGVLRVDQGWGSAQLSAAVHELNVGNIAATPAPGANVSVAHT
CCCCHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEEE
KSVEGWAVQGGLKINAPFVALGDALYLQGAYADGAQMYTGYCAFTGCYTQLNNGFHGQKI
CCCCCEEEECCEEECCCEEEECCEEEEEECCCCCCHHEEEEHHHHHHHHHHCCCCCHHHH
YQSFSDATVNPFTGQLQTSQSFSAVASFLHYWTPEWRSAVFGSYGEQDFSRNARLAQGAL
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHHH
YNVLNFNGAANFGSNAVGAPGTRFYQLSQALRDTYQFVAGGSIIWSPVRDLDIGVEAFYT
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHHHHHH
QIGVKHGRAIDSDKSPTAYANVAGINNGTFVPRTVTQDSVSQVRFRVQRDF
HHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLLRSSLLGSAAAFAAVGAAHAADLPIRKGVPVEYVRVCGAYGAGFFYIPGTDTCLRIS
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEC
GRARFEGGYMTASTRQAGTNAGDSAGYQGRLRINLDARTQTAYGTLRAFVRLDAGSRTGY
CCEEECCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHEEEEEEECCCCCCCC
ARSGTQARIGQAYDATGVDEAGHAQQFMNVDKAFIQFAGLTAGRASSFFDFYAHDFEIYG
CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCEEEEEE
ATSGSDVSSTNLLAYTVTAGYGLSATLSVEDPVFRRSPIYAPAGTASPASPVFVGYFGGA
CCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
PIGVSSIDSVQRERLPDVVGVLRVDQGWGSAQLSAAVHELNVGNIAATPAPGANVSVAHT
CCCCHHHHHHHHHHCCHHEEEEEECCCCCCHHHHHHHHHCCCCCEEECCCCCCCEEEEEE
KSVEGWAVQGGLKINAPFVALGDALYLQGAYADGAQMYTGYCAFTGCYTQLNNGFHGQKI
CCCCCEEEECCEEECCCEEEECCEEEEEECCCCCCHHEEEEHHHHHHHHHHCCCCCHHHH
YQSFSDATVNPFTGQLQTSQSFSAVASFLHYWTPEWRSAVFGSYGEQDFSRNARLAQGAL
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHCCCHHHHHHH
YNVLNFNGAANFGSNAVGAPGTRFYQLSQALRDTYQFVAGGSIIWSPVRDLDIGVEAFYT
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHCCHHHHHH
QIGVKHGRAIDSDKSPTAYANVAGINNGTFVPRTVTQDSVSQVRFRVQRDF
HHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2509359 [H]