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The map label for this gene is omp2b [H]

Identifier: 170751468

GI number: 170751468

Start: 5404701

End: 5406353

Strand: Direct

Name: omp2b [H]

Synonym: Mrad2831_5088

Alternate gene names: 170751468

Gene position: 5404701-5406353 (Clockwise)

Preceding gene: 170751467

Following gene: 170751469

Centisome position: 88.92

GC content: 66.49

Gene sequence:

>1653_bases
ATGAAGCTCTTGAAGAGCTCATTGCTCGGGTCTGCTGCTGCGTTCGCGGCGGTGGGTGCTGCTCATGCCGCCGACCTGCC
GGTCAAGAAGGCGGTCCCGATCGAGTACGTCCGCGTCTGCGGCGCCTACGGCGCCGGCTTCTTCTACATTCCCGGCACCG
ACACCTGCCTGCGTCTCTCCGGCCGCGCCCGGTTCGAGGGCGGCTACATGACCAGCTACTCGCGGCAGAACGGCAACGGC
GGTGACACGTCGGGCTACCAGGGCCGGATGCGCATCAACCTCGATGCCCGCACCCAGACCGCCTACGGCACGCTGCGCGC
CTTCGTCCGCCTCGATGCCGGCGCCCGCACCGGCTACTCCGGCGTCGGCACCTCCGGCACCCAGCAGCGTATCGGCCAGG
CCTTCCCGGGCCTGGGCATCGACAGCTTCGGCCGTGACCAGCAGTTCGTGAACGTCGACAAGGCGTTCATCCAGTTCGCC
GGCATGACCGCCGGTCGCGCCTCGTCGTTCTTCGACTTCTACGCCCACGACTTCGAGTTCGCCGGCGCCACCGCCGGTTC
GGACCTGGCGTCCACCAACCTGCTCGCCTACACGGCCACGCTCGGCAACGGCCTGTCCGCCACGATCTCGGCCGAAGATC
CGGTCTTCCGCCGCAGCCCGATCTTCTCGGCCTCGAACAACCCGTCTGGCGCCACGGTCAACGCCAACATTGCCAACTTC
GCGCAGTCGAACTCGCCGGCCGAAGTGTTCATCGGTTACACCAACGGCCAGCCCACCCGCTACAGCTTCGTCGACGTGAT
CCAGCGCTCGCGCATGCCCGACTTCGTCGGCGCACTGCGTCTCGACCAGGCCTGGGGCTCGGCTCAGCTGTCGGCGGCTG
TTCACGAGCTGAACGTCGGCAACGTCGCCAACGGCGCCGGTACCGGGTCCGGCTCGAACATCAGCATCCCGCACACCAGC
AACTCGTACGGCTGGGCGGTGCAGGGCGGCTTGAAGATCAACACGCCGTTCATCGCTCCAGGCGACGCCCTCTACCTGCA
GGGCGCCTACGGCTCCGGCGCTCAGCTCTACACCGGCTACTCTCAGTTCAGCGGCTCCTACTCGCAGAACGCGGCCACGA
TCCAGGGCCAGAAGTTCAACCAGTTCTTCAACGACGCGACGGTCAACCCGTTCACGGGTCAGCTGGAGCAGTCCACGAGC
TTCTCCGCCACGGCCTCGTACCTCCACTACTGGACGCCGGAGTGGCGCTCGGCCTTCTTCGGGTCGTACGGTGAGATGAA
CTTCTCGCAGTCGGCTCGTGCGGCTCAGGGCATCGCCTACGCCGTTGCCAACCCGTTCGGCCTGATCAACTTCGGCGCCA
ACGCCGTCGGGACGCCTGGTACGCGCTTCTACAACCTCAGCGAGGCGCTGCGCGACACCTACCAGTTCGTGGCGGGCGGC
AGCATCATCTGGTCGCCGGTGAAGGACCTCGATATCGGCGTCGAGGGCTTCTACACCCAGATCGGTGTCAAGAACGGACG
CGTGATCGACAAGGACAAGAGCCCGACGGCCTACGCGAACGTCGCCGGCATCAACAACGGCACCTTCGTGCCGCGGACCA
CGACGGCGGACAGCGTCTCCACCTTCCGCTTCCGCGTCCAGCGCGACTTCTAA

Upstream 100 bases:

>100_bases
CCTGCCACTTAAGACGCGGGCCAAACCTACAGAACGTGCGGCTAGACCCGGATAACCGGGCACGTCCGCATCATTGGGTC
TCGAAGCTTTGGAGATGTCT

Downstream 100 bases:

>100_bases
GCCACTCCACCGGCGCCGGGGCTCCGGCCTCCGCGCCGGTCCCCGTGCTTCAGAAACCTCAAGGCTCGGCTTCGGCCGGG
CCTTTTTCGTTGTGTCGGGC

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MKLLKSSLLGSAAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLSGRARFEGGYMTSYSRQNGNG
GDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGYSGVGTSGTQQRIGQAFPGLGIDSFGRDQQFVNVDKAFIQFA
GMTAGRASSFFDFYAHDFEFAGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSASNNPSGATVNANIANF
AQSNSPAEVFIGYTNGQPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNVGNVANGAGTGSGSNISIPHTS
NSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTGYSQFSGSYSQNAATIQGQKFNQFFNDATVNPFTGQLEQSTS
FSATASYLHYWTPEWRSAFFGSYGEMNFSQSARAAQGIAYAVANPFGLINFGANAVGTPGTRFYNLSEALRDTYQFVAGG
SIIWSPVKDLDIGVEGFYTQIGVKNGRVIDKDKSPTAYANVAGINNGTFVPRTTTADSVSTFRFRVQRDF

Sequences:

>Translated_550_residues
MKLLKSSLLGSAAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLSGRARFEGGYMTSYSRQNGNG
GDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGYSGVGTSGTQQRIGQAFPGLGIDSFGRDQQFVNVDKAFIQFA
GMTAGRASSFFDFYAHDFEFAGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSASNNPSGATVNANIANF
AQSNSPAEVFIGYTNGQPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNVGNVANGAGTGSGSNISIPHTS
NSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTGYSQFSGSYSQNAATIQGQKFNQFFNDATVNPFTGQLEQSTS
FSATASYLHYWTPEWRSAFFGSYGEMNFSQSARAAQGIAYAVANPFGLINFGANAVGTPGTRFYNLSEALRDTYQFVAGG
SIIWSPVKDLDIGVEGFYTQIGVKNGRVIDKDKSPTAYANVAGINNGTFVPRTTTADSVSTFRFRVQRDF
>Mature_550_residues
MKLLKSSLLGSAAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLSGRARFEGGYMTSYSRQNGNG
GDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGYSGVGTSGTQQRIGQAFPGLGIDSFGRDQQFVNVDKAFIQFA
GMTAGRASSFFDFYAHDFEFAGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSASNNPSGATVNANIANF
AQSNSPAEVFIGYTNGQPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNVGNVANGAGTGSGSNISIPHTS
NSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTGYSQFSGSYSQNAATIQGQKFNQFFNDATVNPFTGQLEQSTS
FSATASYLHYWTPEWRSAFFGSYGEMNFSQSARAAQGIAYAVANPFGLINFGANAVGTPGTRFYNLSEALRDTYQFVAGG
SIIWSPVKDLDIGVEGFYTQIGVKNGRVIDKDKSPTAYANVAGINNGTFVPRTTTADSVSTFRFRVQRDF

Specific function: Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 58411; Mature: 58411

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKSSLLGSAAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEC
GRARFEGGYMTSYSRQNGNGGDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGYS
CCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHEEHEEECCCCCCCCC
GVGTSGTQQRIGQAFPGLGIDSFGRDQQFVNVDKAFIQFAGMTAGRASSFFDFYAHDFEF
CCCCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHCCEEE
AGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSASNNPSGATVNANIANF
CCCCCCCCHHHCCEEEEEEECCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEECHHHHH
AQSNSPAEVFIGYTNGQPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNVG
HCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCC
NVANGAGTGSGSNISIPHTSNSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTGY
CCCCCCCCCCCCEEECCCCCCCCCEEEECCEEECCCEECCCCEEEEECCCCCCCEEEECH
SQFSGSYSQNAATIQGQKFNQFFNDATVNPFTGQLEQSTSFSATASYLHYWTPEWRSAFF
HHHCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHEECCCHHHHHHC
GSYGEMNFSQSARAAQGIAYAVANPFGLINFGANAVGTPGTRFYNLSEALRDTYQFVAGG
CCCCCCCCCHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCC
SIIWSPVKDLDIGVEGFYTQIGVKNGRVIDKDKSPTAYANVAGINNGTFVPRTTTADSVS
EEEECCCHHCCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEECCCCEEECCCCCCCCCE
TFRFRVQRDF
EEEEEEEECC
>Mature Secondary Structure
MKLLKSSLLGSAAAFAAVGAAHAADLPVKKAVPIEYVRVCGAYGAGFFYIPGTDTCLRLS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCEEEEEC
GRARFEGGYMTSYSRQNGNGGDTSGYQGRMRINLDARTQTAYGTLRAFVRLDAGARTGYS
CCEEECCCEEEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHEEHEEECCCCCCCCC
GVGTSGTQQRIGQAFPGLGIDSFGRDQQFVNVDKAFIQFAGMTAGRASSFFDFYAHDFEF
CCCCCCHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCHHHHHHHHCCEEE
AGATAGSDLASTNLLAYTATLGNGLSATISAEDPVFRRSPIFSASNNPSGATVNANIANF
CCCCCCCCHHHCCEEEEEEECCCCCEEEEECCCCCEECCCCCCCCCCCCCCEEECHHHHH
AQSNSPAEVFIGYTNGQPTRYSFVDVIQRSRMPDFVGALRLDQAWGSAQLSAAVHELNVG
HCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCC
NVANGAGTGSGSNISIPHTSNSYGWAVQGGLKINTPFIAPGDALYLQGAYGSGAQLYTGY
CCCCCCCCCCCCEEECCCCCCCCCEEEECCEEECCCEECCCCEEEEECCCCCCCEEEECH
SQFSGSYSQNAATIQGQKFNQFFNDATVNPFTGQLEQSTSFSATASYLHYWTPEWRSAFF
HHHCCCCCCCCEEECCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHEECCCHHHHHHC
GSYGEMNFSQSARAAQGIAYAVANPFGLINFGANAVGTPGTRFYNLSEALRDTYQFVAGG
CCCCCCCCCHHHHHHHCEEEEECCCCEEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCC
SIIWSPVKDLDIGVEGFYTQIGVKNGRVIDKDKSPTAYANVAGINNGTFVPRTTTADSVS
EEEECCCHHCCCCCCEEEEEEECCCCEEEECCCCCCEEEEEEECCCCEEECCCCCCCCCE
TFRFRVQRDF
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2509359 [H]