| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is ydjZ [C]
Identifier: 170751446
GI number: 170751446
Start: 5380107
End: 5380910
Strand: Direct
Name: ydjZ [C]
Synonym: Mrad2831_5065
Alternate gene names: 170751446
Gene position: 5380107-5380910 (Clockwise)
Preceding gene: 170751445
Following gene: 170751447
Centisome position: 88.52
GC content: 73.13
Gene sequence:
>804_bases GTGAGCGAGACCGGCAACGCGCCCGTCGCCGAGGGTCGCGCGGAGAGCCGCGAAGGACGCTGGAAGCGGCTGCGGCGCTG GCTCCCGCTCGTGCTGCTCCTGACGGTGTCGACGGTGGTCCTGGTTTCGGGGGCCGCGCAGCTCCTCAGCCTCGACCGCC TGCTCACCTCGCGCCTCTGGCTGCGGGGCTTCGTCGAGGCCGGCTATCTCCGCGCGCTGGTCGCGGCCTACTGCCTCTAT GTCGGGGCCGTCGTCGTGTCTGTGCCGGCCACGCTGATCCTGACGATGGTCTGCGGCTTCCTGTTCGGCATCGTTCCGGG GGCGCTCACCGCGGTCTGTGCCGCCACCACCGGAGCGGCCATCGTGTTCGCCATCGGCCGCGGGCCGGGCGCCGACCTCC TGCGGCGCATGGGCGGCACGCGCCTCGCCGGGCTGGCCGAGGGCTTCCGGCGCGACGCCTTCGGCTACATCGCCGTGCTG CGCCTCCTGCCGCTGTTCCCATTCTGGGTGACCAACCTCGCACCCGCCGCCTTCGGGGTGAAGATGCGGGTCTTCGTGCT CGCGACGTTCCTGGGGTTGCTGCCGGGGGCTCTCGTGTACGCCACCACGGGCGCCGGCATCGAGGACGTCGTCGCCGCCC ACGAGGCCGCGAAGGCCGCCTGCCTGGCGGCGGGGTCGGGCGGCTGCGACACGGCTCTGACCCTGCGCGCCCTGGTCACG CCGAAGATGGTGGCGGGTCTCGGGATGCTGGCCGCCTTCGCTCTGGTTAGCATGCTGCTGAGCCGGCGCGCCAAGCGCGG CTGA
Upstream 100 bases:
>100_bases GGATCGAGGCCTGGGCCCGGCGCAACGGCGTCGAGGTCCTGGGCCTGAAGCCGACCTTCCCGGGCGGGTTCTTCAAGATC CTGCGGATGCGCAAGCCCGG
Downstream 100 bases:
>100_bases CAGGCGCGGCTGACAGGCGCCGCCGGGATACGCGATCCACCGCCGGATCCGTTTTTCCGTGTCTAAGGGCACATGCAACC GCGTGGGGGTGGATATCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Mercuric Reductase; SNARE Associated Golgi Protein-Associated Protein; Phospholipase D/Transphosphatidylase; Phospholipase D; SNARE Associated Golgi Protein-Like Protein; Integral Membrane Protein; Phospholipase D Domain Protein; Pyridine Nucleotide-Disulphide Oxidoreductase; Rhodanese Domain-Containing Protein; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Snare Associated Golgi Protein-Related Protein; SNARE-Associated Family Membrane Protein; Ribosomal Protein S; SNARE Associated Golgi Protein-Related Protein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSETGNAPVAEGRAESREGRWKRLRRWLPLVLLLTVSTVVLVSGAAQLLSLDRLLTSRLWLRGFVEAGYLRALVAAYCLY VGAVVVSVPATLILTMVCGFLFGIVPGALTAVCAATTGAAIVFAIGRGPGADLLRRMGGTRLAGLAEGFRRDAFGYIAVL RLLPLFPFWVTNLAPAAFGVKMRVFVLATFLGLLPGALVYATTGAGIEDVVAAHEAAKAACLAAGSGGCDTALTLRALVT PKMVAGLGMLAAFALVSMLLSRRAKRG
Sequences:
>Translated_267_residues MSETGNAPVAEGRAESREGRWKRLRRWLPLVLLLTVSTVVLVSGAAQLLSLDRLLTSRLWLRGFVEAGYLRALVAAYCLY VGAVVVSVPATLILTMVCGFLFGIVPGALTAVCAATTGAAIVFAIGRGPGADLLRRMGGTRLAGLAEGFRRDAFGYIAVL RLLPLFPFWVTNLAPAAFGVKMRVFVLATFLGLLPGALVYATTGAGIEDVVAAHEAAKAACLAAGSGGCDTALTLRALVT PKMVAGLGMLAAFALVSMLLSRRAKRG >Mature_266_residues SETGNAPVAEGRAESREGRWKRLRRWLPLVLLLTVSTVVLVSGAAQLLSLDRLLTSRLWLRGFVEAGYLRALVAAYCLYV GAVVVSVPATLILTMVCGFLFGIVPGALTAVCAATTGAAIVFAIGRGPGADLLRRMGGTRLAGLAEGFRRDAFGYIAVLR LLPLFPFWVTNLAPAAFGVKMRVFVLATFLGLLPGALVYATTGAGIEDVVAAHEAAKAACLAAGSGGCDTALTLRALVTP KMVAGLGMLAAFALVSMLLSRRAKRG
Specific function: Unknown
COG id: COG0398
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI66392190, Length=160, Percent_Identity=26.25, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17532687, Length=154, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI18859941, Length=160, Percent_Identity=26.25, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27863; Mature: 27731
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETGNAPVAEGRAESREGRWKRLRRWLPLVLLLTVSTVVLVSGAAQLLSLDRLLTSRLW CCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGFVEAGYLRALVAAYCLYVGAVVVSVPATLILTMVCGFLFGIVPGALTAVCAATTGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IVFAIGRGPGADLLRRMGGTRLAGLAEGFRRDAFGYIAVLRLLPLFPFWVTNLAPAAFGV EEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMRVFVLATFLGLLPGALVYATTGAGIEDVVAAHEAAKAACLAAGSGGCDTALTLRALVT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH PKMVAGLGMLAAFALVSMLLSRRAKRG HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SETGNAPVAEGRAESREGRWKRLRRWLPLVLLLTVSTVVLVSGAAQLLSLDRLLTSRLW CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGFVEAGYLRALVAAYCLYVGAVVVSVPATLILTMVCGFLFGIVPGALTAVCAATTGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IVFAIGRGPGADLLRRMGGTRLAGLAEGFRRDAFGYIAVLRLLPLFPFWVTNLAPAAFGV EEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KMRVFVLATFLGLLPGALVYATTGAGIEDVVAAHEAAKAACLAAGSGGCDTALTLRALVT HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH PKMVAGLGMLAAFALVSMLLSRRAKRG HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA