| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is fabZ [H]
Identifier: 170751401
GI number: 170751401
Start: 5337408
End: 5337887
Strand: Direct
Name: fabZ [H]
Synonym: Mrad2831_5020
Alternate gene names: 170751401
Gene position: 5337408-5337887 (Clockwise)
Preceding gene: 170751400
Following gene: 170751402
Centisome position: 87.82
GC content: 71.25
Gene sequence:
>480_bases ATGCGCCTCGAATATTTCGAGATGATCGATTCCGTGCGGCTCCTCGACAGGGCCGCCGGCCGCATCGAGGCGCTCGCCCG GGTTCCGATGGCGAGCCCGGTCTTCGAGGGGCATTTCCCCGGCCATCCCCTCGTGCCGGGGGTGCTCCTGACCGAGACGA TGGCCCAGGCCTCCGGGTACCTCGTGCTCGCCCATCTCGACTTCGCCCGGATGCCGTTCCTCACCGGGGTCGACAAGGCG CGCTTCCGGTCCTTCGTCGGGCCCGGCGCGGACCTCCTCGTCACGGCGACCCTGGAGCACGACGGCTCGGGCTACGCGGT GACCAAGGCGGCGATCAGCCACGACGGCAAGGCGCTGTGCGACGCGGAGCTCCGCTTCCGCACCATGCCGTTCCCGGACG GGCTCGACGCGCCGATGCGCGAGCGGGCGCGGACGATCGGCCTGTTTCCCGATTCGGCGCCGGCCGAACGCGAGCCCTGA
Upstream 100 bases:
>100_bases GCCGAGGAGTACTTCGTCCTCAAGAACCTGTGCGCGCGCATCGACGGCCTCGTGGCCGAGAAGGCCGCCAAGGTCTGAAC CAAGGCCGATCCGACCCGTC
Downstream 100 bases:
>100_bases GTCAGCCATGAGCCGCCCCGTCGTCGTCACCGGCCTCGGCCTCGTCTCCTGCGCGGGTGAGGGCGTCGACGCCCACCTGG CCGCCCTCGCCGGGGAGGCT
Product: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MRLEYFEMIDSVRLLDRAAGRIEALARVPMASPVFEGHFPGHPLVPGVLLTETMAQASGYLVLAHLDFARMPFLTGVDKA RFRSFVGPGADLLVTATLEHDGSGYAVTKAAISHDGKALCDAELRFRTMPFPDGLDAPMRERARTIGLFPDSAPAEREP
Sequences:
>Translated_159_residues MRLEYFEMIDSVRLLDRAAGRIEALARVPMASPVFEGHFPGHPLVPGVLLTETMAQASGYLVLAHLDFARMPFLTGVDKA RFRSFVGPGADLLVTATLEHDGSGYAVTKAAISHDGKALCDAELRFRTMPFPDGLDAPMRERARTIGLFPDSAPAEREP >Mature_159_residues MRLEYFEMIDSVRLLDRAAGRIEALARVPMASPVFEGHFPGHPLVPGVLLTETMAQASGYLVLAHLDFARMPFLTGVDKA RFRSFVGPGADLLVTATLEHDGSGYAVTKAAISHDGKALCDAELRFRTMPFPDGLDAPMRERARTIGLFPDSAPAEREP
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=123, Percent_Identity=37.3983739837398, Blast_Score=83, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 17339; Mature: 17339
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLEYFEMIDSVRLLDRAAGRIEALARVPMASPVFEGHFPGHPLVPGVLLTETMAQASGY CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCE LVLAHLDFARMPFLTGVDKARFRSFVGPGADLLVTATLEHDGSGYAVTKAAISHDGKALC EEEEECCHHHCCHHCCCCHHHHHHHCCCCCCEEEEEEEECCCCCEEEEHHHHHCCCCEEE DAELRFRTMPFPDGLDAPMRERARTIGLFPDSAPAEREP CCCEEEEECCCCCCCCCHHHHHHHEECCCCCCCCCCCCC >Mature Secondary Structure MRLEYFEMIDSVRLLDRAAGRIEALARVPMASPVFEGHFPGHPLVPGVLLTETMAQASGY CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCE LVLAHLDFARMPFLTGVDKARFRSFVGPGADLLVTATLEHDGSGYAVTKAAISHDGKALC EEEEECCHHHCCHHCCCCHHHHHHHCCCCCCEEEEEEEECCCCCEEEEHHHHHCCCCEEE DAELRFRTMPFPDGLDAPMRERARTIGLFPDSAPAEREP CCCEEEEECCCCCCCCCHHHHHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA