Definition Methylobacterium radiotolerans JCM 2831 chromosome, complete genome.
Accession NC_010505
Length 6,077,833

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The map label for this gene is yuxL [H]

Identifier: 170751156

GI number: 170751156

Start: 5086907

End: 5088805

Strand: Reverse

Name: yuxL [H]

Synonym: Mrad2831_4772

Alternate gene names: 170751156

Gene position: 5088805-5086907 (Counterclockwise)

Preceding gene: 170751158

Following gene: 170751151

Centisome position: 83.73

GC content: 66.72

Gene sequence:

>1899_bases
ATGCAAGGCGATCTGATCCCACGGCGCATCCTGTTCGGAAATCCCGAGCGTGCCTTTCGGCAAATCAGCCCGGACGGCGA
GTGGTTGACCTGGGTCGCACCCGCCAATGGGGTGATGAACATTTTCATCGCGCCGCGCGCGACTCCCGACCGCGCTCGGC
AGCTGACCTTCGATCAGGGCCGCGGCGTCACCGCCTACTGCTGGACGATGGGTGCGACGCATCTTGTCTACGGCCAGGAC
ACTGACGGCGACGAAAACACCCGCCTCTACGCGCTGAACATCGCCGACGGGAGCGTGCGCAACCTGACGCCCGAACCCGA
TGTGAAGGCGAACCTCGGCGGTGTGAGTCGCAAGATCCGCGACATGATCATGGTCTATCTCAACGACCGGGATCCGCGGT
TTCACGATCTATACGCGATCAACCCGGCAACAGGCGAGCGGCGCAAGCTCGCTGACAATCCCGGCTTTGCCGACATCATG
GTCGACGCGGCGTTCCGGCCGACCCTCGCGGTCGCCCTGCACCCGAACGGCGAGATGCACCTGCTGCGCAATGCACGCGC
CGAGGGGCCACCCGCGCCCGAGGACTGGCAGCCGTGGCAGACCATCCCCCGCGAGGATGCACGCACCACGTTCCCGCTCC
ACCTGAGCGCCGATGGGTCGATCCTCTACATGGCCGACAGCCGCGGTCGCGACACCGCCGCGCTCAGCGCGATCACCCTC
GCCACGGGTGAGCGGACCCTGATTGCGAGCGACCCGCGGGCCGACATCACCGAGACCTTCACCGACGCCGAGACGCAGGA
GATCCTGGGCTACGGCGTCTCCTACCTCGTTCGCGAGTTCCATACGGTCGATCCGCGCGCCGGCGATTTCGCGTGGCTGG
CAGATCAAGGCCTCGAGAACCCCGTCGTGGTCGGTCGCACCGAGGCCGACGACATCTGGCTCGTCGGGACCTATTCCGAC
GTCTCCCCGGGCGAGGTCTTCGTGTTCGACCGGCCGAACCGCACGCTCACGCGGCTGCCGCCAAGCTCGCCAGAGCTGGC
AGCGGCAGGTCTCCGTCCGATGGAGCCGCACACGATCCCGACCCGGGACGGGCTGAACTTGATCTCGTACGCGACCCTGC
CGGAACGCGCGGGCCCGAGTGAGCGCGTTCCGCTCGTGCTCGTCGTCCACGGCGGCCCCACGGCCCGTGACGAGTTCGGT
TGCAACCGGGAGCATCAATGGCTTGCCAATCGCGGTTACGCTGCGCTCAGCGTCAACTTCCGCGGCTCTGCCGGATTCGG
GAAGGCGTTCGTCAACGCCGCCGAGGGTGAGTGGGGGCGGCGGATGGACGACGACCTCATCGAGGCCGTGACTTGGGCCA
AGGATAACCTGCCCATCGATCCGAGCCGGATCGCCATCTACGGCGCGTCCTACGGCGGCTACGCTACCCTCGTCGGGCTC
ACCCGAAACCCGGATCTCTACGCCTGCGGTGTCGACATCGTCGGACCGTCGAACTTGGAGACCTTACTAGAGACGATTCC
TCCTTACTGGGAGGCGGGCCGCCATCAGTTGAAGCGGATGATCGGTGACCCGGACACCGCCGAGGGCCTGGCACGCCTGC
GAGATCGCTCGCCGCTTCATCAGGCGGACCGCATTCGCCGGCCGCTCATGATCGCGCAGGGCGCCAACGATCCGCGGGTG
AAGCGGGCAGAGAGCGACCAGATGGTCGCGGCCCTGCGCAGCAAGGCCATCCCTGTCACCTATCTGCTGTTCCCCGACGA
GGGACACGGGTTCGAGCGGCCGGAGAACACTCTTAGCTTCTATGCCCAGGCCGAGGCGTTCCTGGCTGCGCATCTTGGCG
GCCGCTGTGAGCCGGACGATCCCATGACCCGGGACCGCAGCAGCATGCAAATCCTCTGA

Upstream 100 bases:

>100_bases
CGCGCCACAATCGCCACACGATTATCCTCACGTCAGCGTACAGTAGATCTCTATTTACCGGTCGAGAACAAATCCCTCTT
CCTCCATCGAAGGCTCTCAA

Downstream 100 bases:

>100_bases
TCGCGCCGCCGAGCCGTCACCGAGGCCGGCGATGGTCTCAACAGCATCGCCGGATCCCTCGCGAGGGCACGAGCGGTTGA
CTGAACCATCGTGTGTCCGC

Product: peptidase S9 prolyl oligopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 632; Mature: 632

Protein sequence:

>632_residues
MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQGRGVTAYCWTMGATHLVYGQD
TDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIRDMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIM
VDAAFRPTLAVALHPNGEMHLLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL
ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLENPVVVGRTEADDIWLVGTYSD
VSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIPTRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFG
CNREHQWLANRGYAALSVNFRGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL
TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLHQADRIRRPLMIAQGANDPRV
KRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSFYAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL

Sequences:

>Translated_632_residues
MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQGRGVTAYCWTMGATHLVYGQD
TDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIRDMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIM
VDAAFRPTLAVALHPNGEMHLLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL
ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLENPVVVGRTEADDIWLVGTYSD
VSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIPTRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFG
CNREHQWLANRGYAALSVNFRGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL
TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLHQADRIRRPLMIAQGANDPRV
KRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSFYAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL
>Mature_632_residues
MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQGRGVTAYCWTMGATHLVYGQD
TDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIRDMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIM
VDAAFRPTLAVALHPNGEMHLLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL
ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLENPVVVGRTEADDIWLVGTYSD
VSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIPTRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFG
CNREHQWLANRGYAALSVNFRGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL
TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLHQADRIRRPLMIAQGANDPRV
KRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSFYAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=236, Percent_Identity=28.3898305084746, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI16933540, Length=233, Percent_Identity=25.7510729613734, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI18450280, Length=272, Percent_Identity=25.7352941176471, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI37577089, Length=272, Percent_Identity=25.7352941176471, Blast_Score=76, Evalue=9e-14,
Organism=Homo sapiens, GI18765694, Length=240, Percent_Identity=24.5833333333333, Blast_Score=71, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI25144537, Length=660, Percent_Identity=35.6060606060606, Blast_Score=393, Evalue=1e-109,
Organism=Caenorhabditis elegans, GI25144540, Length=442, Percent_Identity=37.3303167420815, Blast_Score=291, Evalue=6e-79,
Organism=Caenorhabditis elegans, GI25144543, Length=552, Percent_Identity=32.2463768115942, Blast_Score=281, Evalue=6e-76,
Organism=Caenorhabditis elegans, GI17552908, Length=255, Percent_Identity=29.8039215686275, Blast_Score=105, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI25149159, Length=302, Percent_Identity=28.476821192053, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI45550825, Length=236, Percent_Identity=27.5423728813559, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45553511, Length=236, Percent_Identity=27.5423728813559, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI45551969, Length=236, Percent_Identity=27.5423728813559, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24582257, Length=215, Percent_Identity=23.7209302325581, Blast_Score=76, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 69772; Mature: 69772

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQG
CCCCCCCHHEEECCHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHEEECCCC
RGVTAYCWTMGATHLVYGQDTDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIR
CCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
DMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIMVDAAFRPTLAVALHPNGEMH
EEEEEEECCCCCCEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCCCEEEEEECCCCCEE
LLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL
EEECCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHEEEEEE
ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLEN
ECCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCCCC
PVVVGRTEADDIWLVGTYSDVSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIP
CEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCHHHCCCCCCCCCCCC
TRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFGCNREHQWLANRGYAALSVNF
CCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHCCCCCCHHHHHCCCEEEEEEEE
RGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL
CCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEE
TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLH
ECCCCEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
QADRIRRPLMIAQGANDPRVKRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSF
HHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHH
YAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQGDLIPRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQG
CCCCCCCHHEEECCHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHEEECCCC
RGVTAYCWTMGATHLVYGQDTDGDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIR
CCCEEEEEECCCEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
DMIMVYLNDRDPRFHDLYAINPATGERRKLADNPGFADIMVDAAFRPTLAVALHPNGEMH
EEEEEEECCCCCCEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCCCEEEEEECCCCCEE
LLRNARAEGPPAPEDWQPWQTIPREDARTTFPLHLSADGSILYMADSRGRDTAALSAITL
EEECCCCCCCCCCCCCCCHHCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHEEEEEE
ATGERTLIASDPRADITETFTDAETQEILGYGVSYLVREFHTVDPRAGDFAWLADQGLEN
ECCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCCCC
PVVVGRTEADDIWLVGTYSDVSPGEVFVFDRPNRTLTRLPPSSPELAAAGLRPMEPHTIP
CEEEECCCCCCEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCHHHCCCCCCCCCCCC
TRDGLNLISYATLPERAGPSERVPLVLVVHGGPTARDEFGCNREHQWLANRGYAALSVNF
CCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCHHCCCCCCHHHHHCCCEEEEEEEE
RGSAGFGKAFVNAAEGEWGRRMDDDLIEAVTWAKDNLPIDPSRIAIYGASYGGYATLVGL
CCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEE
TRNPDLYACGVDIVGPSNLETLLETIPPYWEAGRHQLKRMIGDPDTAEGLARLRDRSPLH
ECCCCEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
QADRIRRPLMIAQGANDPRVKRAESDQMVAALRSKAIPVTYLLFPDEGHGFERPENTLSF
HHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHH
YAQAEAFLAAHLGGRCEPDDPMTRDRSSMQIL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]