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The map label for this gene is dcrA [H]

Identifier: 170751037

GI number: 170751037

Start: 4942440

End: 4943684

Strand: Reverse

Name: dcrA [H]

Synonym: Mrad2831_4648

Alternate gene names: 170751037

Gene position: 4943684-4942440 (Counterclockwise)

Preceding gene: 170751038

Following gene: 170751033

Centisome position: 81.34

GC content: 74.7

Gene sequence:

>1245_bases
ATGTTCAGTTTGCGCCGGCAGCGTCAGACCCCTGACGCGCTAGCAACCCCGGTGACGGCGATCGCACCGGTCGAGACGGC
CGTTGCCGCGCCGGTCGAGACGGCACCGAATCCCGTCGCGGAACTGGCCGTCGACCGGGAATGGCTGACCCTCCTGGCGC
GCCTGTCCGCCTCCGCGTCCGATGCCGGCACCTCGATCGGCTGGATGACCCACGACGCCTCCGGCACCGCCGAGCAGGCC
CGTCTCATCGCGGCCGCCAGCGAGGAACTCGCCGCGACCACCGGTGAGATCGCGGCCCGCTCCTCGTCGGCGGCCGAGAT
GGCCGAGACCGCCCGGGCGGGCATCGCCACCTGCGTGGGCGACCTGCACCGGGCCACCGACGGCATGCGCGGGATCGAGG
AGGGCACCGAGGAGATCGGCAGCCGTCTCGACAGCTTCTCGACCGCCGCGCTGCGGATCGAGGAGATGGCCGGCACGATC
GCGGCGATCTCGGCCCAGACCAACCTGCTCGCGCTCAACGCCACGATCGAGGCGGCCCGGGCCGGCGAGGCCGGGCGCGG
CTTCGCGGTGGTCGCCGCCGAGGTGAAGACGCTGTCGGCGCAGACCGCGAAGGCGACGGACGAGATCCGGGCGCGGGTCA
GCGGCCTGCGCGAGGAGATGGCCGCGATGCAGGCGGCCGTGTCGCGCAGCCGCAACGCCGTCGAGGCCGGCGCGGCCGCG
ATGGTGCGGGCCAATGCCCGCGTCGAGGCCGAGAGCGGCGCCGTCGCGAACGTCGCCGCGCAGATGCGCGAGGCCTCGGA
GATCCTCGGCCAGCAGATGCAGGCCACCGGCGACATCGCCCAGAACGTCGGCCGCATCGCGGAAGGGACCGACAAGGCGC
GCCGGGAGATCGGCGACGCCCTCGCGCAGCTCGGACGGATCGAGGATCTCGGCCGCACCCTGCTCGACCGGCAGACCGGA
ACCACCGCGGATCAGCGGGTGATCCGCCTGTCGGCGGATTGCGCCGCGTGGCGGCGCGCCGTCGCGGCGACGCTGGTCGG
CATGCGCTCGACCGACACGCCGCCGGAGGGGATCCCCGCCGACGCGACGCGGCCGGCCGCCATCGAGACGCCCCTGGCGC
AGGCCCGCGAGCAGGCGGCCGCCCTGGTCCGCCACGTGCGCAGCCAGGCCTGGGACTCGGCGACCACGGCGTTTGTGGCG
TTCGAGGCGGCGGTGAAGGAAGCCCGGGCGGCGATCGAGGCCTGA

Upstream 100 bases:

>100_bases
GATGCCCCGCAACGCTTGCCGGGAGACTAGTCTATCCTTCACCATTGGTTGAAGGTTCTGTGTGACCATGCGCTCCGATT
AGAATGTCGGAGAGGCCCGC

Downstream 100 bases:

>100_bases
AGGCCGGCCGGCCCCGGGTCCGCCGCGACCCGGGGCCGTCTCAGGAGACGATCGGACGCCGTCAGCCCGGCGGCGGCTCG
GATCCCGGAGCTGCCGGCGC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MFSLRRQRQTPDALATPVTAIAPVETAVAAPVETAPNPVAELAVDREWLTLLARLSASASDAGTSIGWMTHDASGTAEQA
RLIAAASEELAATTGEIAARSSSAAEMAETARAGIATCVGDLHRATDGMRGIEEGTEEIGSRLDSFSTAALRIEEMAGTI
AAISAQTNLLALNATIEAARAGEAGRGFAVVAAEVKTLSAQTAKATDEIRARVSGLREEMAAMQAAVSRSRNAVEAGAAA
MVRANARVEAESGAVANVAAQMREASEILGQQMQATGDIAQNVGRIAEGTDKARREIGDALAQLGRIEDLGRTLLDRQTG
TTADQRVIRLSADCAAWRRAVAATLVGMRSTDTPPEGIPADATRPAAIETPLAQAREQAAALVRHVRSQAWDSATTAFVA
FEAAVKEARAAIEA

Sequences:

>Translated_414_residues
MFSLRRQRQTPDALATPVTAIAPVETAVAAPVETAPNPVAELAVDREWLTLLARLSASASDAGTSIGWMTHDASGTAEQA
RLIAAASEELAATTGEIAARSSSAAEMAETARAGIATCVGDLHRATDGMRGIEEGTEEIGSRLDSFSTAALRIEEMAGTI
AAISAQTNLLALNATIEAARAGEAGRGFAVVAAEVKTLSAQTAKATDEIRARVSGLREEMAAMQAAVSRSRNAVEAGAAA
MVRANARVEAESGAVANVAAQMREASEILGQQMQATGDIAQNVGRIAEGTDKARREIGDALAQLGRIEDLGRTLLDRQTG
TTADQRVIRLSADCAAWRRAVAATLVGMRSTDTPPEGIPADATRPAAIETPLAQAREQAAALVRHVRSQAWDSATTAFVA
FEAAVKEARAAIEA
>Mature_414_residues
MFSLRRQRQTPDALATPVTAIAPVETAVAAPVETAPNPVAELAVDREWLTLLARLSASASDAGTSIGWMTHDASGTAEQA
RLIAAASEELAATTGEIAARSSSAAEMAETARAGIATCVGDLHRATDGMRGIEEGTEEIGSRLDSFSTAALRIEEMAGTI
AAISAQTNLLALNATIEAARAGEAGRGFAVVAAEVKTLSAQTAKATDEIRARVSGLREEMAAMQAAVSRSRNAVEAGAAA
MVRANARVEAESGAVANVAAQMREASEILGQQMQATGDIAQNVGRIAEGTDKARREIGDALAQLGRIEDLGRTLLDRQTG
TTADQRVIRLSADCAAWRRAVAATLVGMRSTDTPPEGIPADATRPAAIETPLAQAREQAAALVRHVRSQAWDSATTAFVA
FEAAVKEARAAIEA

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=145, Percent_Identity=40, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788194, Length=140, Percent_Identity=39.2857142857143, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788195, Length=130, Percent_Identity=37.6923076923077, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI2367378, Length=134, Percent_Identity=38.8059701492537, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789453, Length=150, Percent_Identity=30, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 42888; Mature: 42888

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLRRQRQTPDALATPVTAIAPVETAVAAPVETAPNPVAELAVDREWLTLLARLSASAS
CCCCCHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
DAGTSIGWMTHDASGTAEQARLIAAASEELAATTGEIAARSSSAAEMAETARAGIATCVG
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DLHRATDGMRGIEEGTEEIGSRLDSFSTAALRIEEMAGTIAAISAQTNLLALNATIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECHHHHHH
AGEAGRGFAVVAAEVKTLSAQTAKATDEIRARVSGLREEMAAMQAAVSRSRNAVEAGAAA
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MVRANARVEAESGAVANVAAQMREASEILGQQMQATGDIAQNVGRIAEGTDKARREIGDA
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LAQLGRIEDLGRTLLDRQTGTTADQRVIRLSADCAAWRRAVAATLVGMRSTDTPPEGIPA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DATRPAAIETPLAQAREQAAALVRHVRSQAWDSATTAFVAFEAAVKEARAAIEA
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSLRRQRQTPDALATPVTAIAPVETAVAAPVETAPNPVAELAVDREWLTLLARLSASAS
CCCCCHHCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
DAGTSIGWMTHDASGTAEQARLIAAASEELAATTGEIAARSSSAAEMAETARAGIATCVG
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DLHRATDGMRGIEEGTEEIGSRLDSFSTAALRIEEMAGTIAAISAQTNLLALNATIEAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECHHHHHH
AGEAGRGFAVVAAEVKTLSAQTAKATDEIRARVSGLREEMAAMQAAVSRSRNAVEAGAAA
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
MVRANARVEAESGAVANVAAQMREASEILGQQMQATGDIAQNVGRIAEGTDKARREIGDA
HHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
LAQLGRIEDLGRTLLDRQTGTTADQRVIRLSADCAAWRRAVAATLVGMRSTDTPPEGIPA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DATRPAAIETPLAQAREQAAALVRHVRSQAWDSATTAFVAFEAAVKEARAAIEA
CCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]