| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170751029
Identifier: 170751029
GI number: 170751029
Start: 4936508
End: 4936981
Strand: Direct
Name: 170751029
Synonym: Mrad2831_4640
Alternate gene names: NA
Gene position: 4936508-4936981 (Clockwise)
Preceding gene: 170751024
Following gene: 170751030
Centisome position: 81.22
GC content: 72.36
Gene sequence:
>474_bases ATGGACATTGTGCCTCCGGCCGAGGACCCGATGCTCGACGACATCTACAACCGCCGTATCCTGGAACTCGCCGCCGACAT CCCCCGGCTCGGCCGGCTCGAGAACCCGGACGCGACCGCCACGGCCCATTCCCGCCTGTGCGGCTCGACCGTGACGGTCG ACCTCGTCCTGGGCGAGGACGGCCGGGTCGCGGATTTCGCCCAGGAGGTCCGGGCCTGCGCCCTCGGGCAGGCCTCCTCG TCGCTGATGGGTCGGCACGTGGTCGGCGCCAGCGCGGAGGAGCTGCGCGGCGTCCGCGAGACCATGCGGTCCATGCTCAA GGAGAACGGTCCGGCGCCCGACGGCGCGTGGTCCGACCTCGCGGTGCTCGAGCCGGTGCGGGACTTCAAGGCGCGCCACG CCTCGACGCTCCTGACCTTCGACGCGGTGGTGGACGCCCTCGACCAGATCGCCGCCAAGCGGCAGGCCGCCTGA
Upstream 100 bases:
>100_bases CCCTGGTCGACGGCCCGCCTCCTCGCGAAGCGGCCGCATCGCGCCTATATCATCGTTCGCGGGGCAACGCGCAATGCGCG TCGCACGCGGCAGAGTCCCG
Downstream 100 bases:
>100_bases CGGGATGGTCCGGCGCGCCGCCCACTGGGCGATCCGCGGCTACCAGCTGACGCTGTCGGGCCTGGTCGGCCGCCAGTGCC GCCACTGGCCGAGCTGCTCC
Product: NifU domain-containing protein
Products: NA
Alternate protein names: NifU Domain-Containing Protein; NifU-Like Protein; Nitrogen Fixation Protein; NifU-Like Protein Involved In Fe-S Cluster Formation; NifU-Related Protein Involved In Fe-S Cluster Formation; Nitrogen-Fixing NifU-Like Protein; NifU-Like Involved In Fe-S Cluster Formation; NIFU-Like Protein; Fe-S Cluster Formation NifU-Like Protein; NifU-Like N Terminal Domain; Nitrogen-Fixing NifU-Like; Fe-S Cluster Formation Protein; Nitrogen-Fixing Nifu Domain Protein; Nitrogen-Fixing NifU Domain-Containing Protein; Nifu Protein; MifU-Like Protein Fe-S Cluster Formation; Nitrogen Fixation Protein NifU
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGEDGRVADFAQEVRACALGQASS SLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDLAVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA
Sequences:
>Translated_157_residues MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGEDGRVADFAQEVRACALGQASS SLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDLAVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA >Mature_157_residues MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGEDGRVADFAQEVRACALGQASS SLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDLAVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA
Specific function: Unknown
COG id: COG0822
COG function: function code C; NifU homolog involved in Fe-S cluster formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16849; Mature: 16849
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGED CCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCC GRVADFAQEVRACALGQASSSLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDIVPPAEDPMLDDIYNRRILELAADIPRLGRLENPDATATAHSRLCGSTVTVDLVLGED CCCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHCCCCEEEEEEECCC GRVADFAQEVRACALGQASSSLMGRHVVGASAEELRGVRETMRSMLKENGPAPDGAWSDL CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH AVLEPVRDFKARHASTLLTFDAVVDALDQIAAKRQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA