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The map label for this gene is ydiU [C]

Identifier: 170751017

GI number: 170751017

Start: 4925436

End: 4926863

Strand: Reverse

Name: ydiU [C]

Synonym: Mrad2831_4628

Alternate gene names: 170751017

Gene position: 4926863-4925436 (Counterclockwise)

Preceding gene: 170751018

Following gene: 170751016

Centisome position: 81.06

GC content: 73.74

Gene sequence:

>1428_bases
ATGGACGACACCGCCTTCACGCCTTCCCGGCGCCACGCCGATCTCGGGCCCGCCTTCTTCGATCCCGTCACCCCGGCCCG
GTTCCCGCGGACCATCCTGCGCTACCGCAATCAGGCCTGGGCGGAGCGGGTCGGCCTGGGCAACCTGTCCGACGAAGCGT
GGATCGCCCATTTCGGCCGGTTCGAGCCCTTACCGGGCAGCTTCGAGACGCCGCTGGCCCTGCGCTACCACGGCCATCAG
TTCCGCTCCTACAATCCGGACCTCGGCGACGGGCGCGGCTTCCTGTTCGCGCAGCTGCACGACCGGCTGGACGGGCGCCT
CCTCGACCTCGGCACCAAGGGCAGCGGCACGACGCCCTGGTCGCGCGGGGCCGACGGGCGGCTCACCCTCAAGGGCGGGG
TGCGCGAGGTGCTGGCCACCGCCCTCCTGGAGGCGCAGGGCGTCTACACCTCGAAGAGCTTCAGCCTGATCGAGACCGGC
GAGGACCTCGTGCGCGGCGACGAGCCCTCGCCGGCGCGCTCCTCGGTGCTGGTGCGCCTGTCCCACGGCCATATCCGCAT
CGGGACCTTCCAGCGCTTCCTGGCGCTCGGCGAGCCGGACAACATCGCCCGGCTCCTCGACCACGCGATCGCGACCCACC
GGCCGGAACTCTGGCGCGACGGCGCGGAGGATCGCGCCGTCGCCTTCCTGGACGACGTGGTCGCCCGGGTCGCCCGGATG
GGGGCGCAGTGGGCGGCGGCCGGCTTCGTCCACGGGGTGCTCAACAGCGACAACATCAACGTCACCGGCGAGAGCTTCGA
TTACGGGCCGTGGCGCTTCCTGCCGCACTTCGACCCGGACTTCACGGCCGCCTCCTTCGACGAGACCGGGCTCTACAGCT
TCGGCCGCCAGCCGGAGGCGCTGTTCTGGAACCTCGCCCGGCTCGCCGACTGCCTGCTGGTGCTGGCCCCCCAGGCGCGC
CTCGAAACCGCCCTCTCGAACTTCGGCCCGGCCCTGCAGGAGGCGTTCGCCGAGGCGCTGTTCCGCCGGCTCGGCCTCGC
CGCGGCGCCGCGGCCGGAGACCGACCGGCTGGTCTCGGCGGTCTGGCGGTTCCTCGCCGAGACGCGGGCGCCCTTCGAGC
GGTTCTTCTTCGACTGGTACGGCGGCCTCGCGAGCGCGCCCCGCGCGCAGGCCGGGCCGTCCGCCGGCCACTACGCGCAC
GAGGCCTTCGCGCCGGTGCGGGCCGCGCTGGAGCCGCTCGCGCCCGCCCCGGGGGCGCGGCTCGACCACCCCTACTTCGC
GGAGGCGCCCTGCACGCTCCTGATCGACGAGGTGGAGGCGTTGTGGGCGCCGATCGCCGCGGCCGACGACTGGTCCCTGT
TCGAGGCCAAGCTCGAAGCGGTGGCCCGGATGGCCGAGGCCTGCGGGACGGTGCCCGCCTCGGCCTGA

Upstream 100 bases:

>100_bases
TTGCTCCGCTCCGCTCGCAAGGACGGAAACCGCAACGGATCCCGTTCCGCCGGCTTGGTAGGACGTGGTCTACCTTCCGA
CTGGAGAGACGCGCCGCCGC

Downstream 100 bases:

>100_bases
GCGGCCTCCTCCTCGGCGAGTCGCCGGCGCTCCTCGGCGTAGCCCCCCGCGATGGCGAGATCGACCAGGCGCCGGGTCAG
CCGGAAGGCCAGCCAGAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MDDTAFTPSRRHADLGPAFFDPVTPARFPRTILRYRNQAWAERVGLGNLSDEAWIAHFGRFEPLPGSFETPLALRYHGHQ
FRSYNPDLGDGRGFLFAQLHDRLDGRLLDLGTKGSGTTPWSRGADGRLTLKGGVREVLATALLEAQGVYTSKSFSLIETG
EDLVRGDEPSPARSSVLVRLSHGHIRIGTFQRFLALGEPDNIARLLDHAIATHRPELWRDGAEDRAVAFLDDVVARVARM
GAQWAAAGFVHGVLNSDNINVTGESFDYGPWRFLPHFDPDFTAASFDETGLYSFGRQPEALFWNLARLADCLLVLAPQAR
LETALSNFGPALQEAFAEALFRRLGLAAAPRPETDRLVSAVWRFLAETRAPFERFFFDWYGGLASAPRAQAGPSAGHYAH
EAFAPVRAALEPLAPAPGARLDHPYFAEAPCTLLIDEVEALWAPIAAADDWSLFEAKLEAVARMAEACGTVPASA

Sequences:

>Translated_475_residues
MDDTAFTPSRRHADLGPAFFDPVTPARFPRTILRYRNQAWAERVGLGNLSDEAWIAHFGRFEPLPGSFETPLALRYHGHQ
FRSYNPDLGDGRGFLFAQLHDRLDGRLLDLGTKGSGTTPWSRGADGRLTLKGGVREVLATALLEAQGVYTSKSFSLIETG
EDLVRGDEPSPARSSVLVRLSHGHIRIGTFQRFLALGEPDNIARLLDHAIATHRPELWRDGAEDRAVAFLDDVVARVARM
GAQWAAAGFVHGVLNSDNINVTGESFDYGPWRFLPHFDPDFTAASFDETGLYSFGRQPEALFWNLARLADCLLVLAPQAR
LETALSNFGPALQEAFAEALFRRLGLAAAPRPETDRLVSAVWRFLAETRAPFERFFFDWYGGLASAPRAQAGPSAGHYAH
EAFAPVRAALEPLAPAPGARLDHPYFAEAPCTLLIDEVEALWAPIAAADDWSLFEAKLEAVARMAEACGTVPASA
>Mature_475_residues
MDDTAFTPSRRHADLGPAFFDPVTPARFPRTILRYRNQAWAERVGLGNLSDEAWIAHFGRFEPLPGSFETPLALRYHGHQ
FRSYNPDLGDGRGFLFAQLHDRLDGRLLDLGTKGSGTTPWSRGADGRLTLKGGVREVLATALLEAQGVYTSKSFSLIETG
EDLVRGDEPSPARSSVLVRLSHGHIRIGTFQRFLALGEPDNIARLLDHAIATHRPELWRDGAEDRAVAFLDDVVARVARM
GAQWAAAGFVHGVLNSDNINVTGESFDYGPWRFLPHFDPDFTAASFDETGLYSFGRQPEALFWNLARLADCLLVLAPQAR
LETALSNFGPALQEAFAEALFRRLGLAAAPRPETDRLVSAVWRFLAETRAPFERFFFDWYGGLASAPRAQAGPSAGHYAH
EAFAPVRAALEPLAPAPGARLDHPYFAEAPCTLLIDEVEALWAPIAAADDWSLFEAKLEAVARMAEACGTVPASA

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=333, Percent_Identity=33.9339339339339, Blast_Score=178, Evalue=1e-44,
Organism=Escherichia coli, GI1787999, Length=313, Percent_Identity=35.4632587859425, Blast_Score=183, Evalue=2e-47,
Organism=Saccharomyces cerevisiae, GI6325034, Length=326, Percent_Identity=29.4478527607362, Blast_Score=128, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 52090; Mature: 52090

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTAFTPSRRHADLGPAFFDPVTPARFPRTILRYRNQAWAERVGLGNLSDEAWIAHFGR
CCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
FEPLPGSFETPLALRYHGHQFRSYNPDLGDGRGFLFAQLHDRLDGRLLDLGTKGSGTTPW
CCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCEEHHHHHHHHCCEEEEECCCCCCCCCC
SRGADGRLTLKGGVREVLATALLEAQGVYTSKSFSLIETGEDLVRGDEPSPARSSVLVRL
CCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCCCCCCCCEEEEEE
SHGHIRIGTFQRFLALGEPDNIARLLDHAIATHRPELWRDGAEDRAVAFLDDVVARVARM
ECCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHH
GAQWAAAGFVHGVLNSDNINVTGESFDYGPWRFLPHFDPDFTAASFDETGLYSFGRQPEA
CHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH
LFWNLARLADCLLVLAPQARLETALSNFGPALQEAFAEALFRRLGLAAAPRPETDRLVSA
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VWRFLAETRAPFERFFFDWYGGLASAPRAQAGPSAGHYAHEAFAPVRAALEPLAPAPGAR
HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
LDHPYFAEAPCTLLIDEVEALWAPIAAADDWSLFEAKLEAVARMAEACGTVPASA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDDTAFTPSRRHADLGPAFFDPVTPARFPRTILRYRNQAWAERVGLGNLSDEAWIAHFGR
CCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCC
FEPLPGSFETPLALRYHGHQFRSYNPDLGDGRGFLFAQLHDRLDGRLLDLGTKGSGTTPW
CCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCEEHHHHHHHHCCEEEEECCCCCCCCCC
SRGADGRLTLKGGVREVLATALLEAQGVYTSKSFSLIETGEDLVRGDEPSPARSSVLVRL
CCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCCCCCCCCEEEEEE
SHGHIRIGTFQRFLALGEPDNIARLLDHAIATHRPELWRDGAEDRAVAFLDDVVARVARM
ECCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHH
GAQWAAAGFVHGVLNSDNINVTGESFDYGPWRFLPHFDPDFTAASFDETGLYSFGRQPEA
CHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHH
LFWNLARLADCLLVLAPQARLETALSNFGPALQEAFAEALFRRLGLAAAPRPETDRLVSA
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
VWRFLAETRAPFERFFFDWYGGLASAPRAQAGPSAGHYAHEAFAPVRAALEPLAPAPGAR
HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
LDHPYFAEAPCTLLIDEVEALWAPIAAADDWSLFEAKLEAVARMAEACGTVPASA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12240834 [H]