| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is msrA [H]
Identifier: 170750901
GI number: 170750901
Start: 4791900
End: 4792556
Strand: Direct
Name: msrA [H]
Synonym: Mrad2831_4512
Alternate gene names: 170750901
Gene position: 4791900-4792556 (Clockwise)
Preceding gene: 170750899
Following gene: 170750904
Centisome position: 78.84
GC content: 71.84
Gene sequence:
>657_bases ATGTTCCTGTTTCGCAAGCGTCCCGCGATGCCGGCCCCGGCCGACGCCCTGCCCGGACGCCCGACCCCGATCCCGACCGC CGAGACGCATGTCGTCAACGGCAACCCGCTCAAGGGTCCCTATCCGCCGGGCACCGGGACGATCGTGCTCGGGCTCGGCT GCTTCTGGGGCGCCGAGCGTCGGTTCTGGCAGCTGCCCGAGGGGGTGTTCGTGACGGCCGTCGGCTACGCCGGCGGCTAC ACCCCGAACCCGACCTACGAGGAGGTCTGCACCGGCCGGACCGGCCACAACGAGGTGGTGCTGGTCGCCTTCGATCCGGC GGTTCTGCCCCTGGAGGCGGTGGTGCGGACCTTCTTCGAGAGTCACGACCCGACGCAGGGGATGCGCCAGGGCAACGATG TCGGCACGCAGTACCGCTCGGGCATCTACACCGTCGGCCCCGACCAGGACGCCGCGGCCCGGTCCGTGCGCGCCGCCTAC GCGGAGGCGCTCAAGGCGCGCGGCTTTCCCGACGTCACCACGGAGATCCGGCCGCTGGAGCAGTTCTACTTCGCGGAGGC CTACCACCAGCAGTACCTGGCGAAGAACCCGGCCGGCTATTGCGGCCTGGGCGGCACCGGCGTCAGCTGCCCGGTGGGAG CCGGCGTCGCCGCCTGA
Upstream 100 bases:
>100_bases AGTCTCGCGGCTCGATTTAGGGCGGCCGGAGCGCCGAACGCTTTCCCGGCGGTCCCGGCCGTTCCATATCGGGCGGAGCC CGAGACCGGAAGGCGAGCCG
Downstream 100 bases:
>100_bases GCCTCACGGGTTCCGGCTGTCGGGCCGCGTCTGCGGGCCCGGCACCGGGGCGCCGGCGGCGCTGCCCCGCAGGGGCGGGG TGCTGTTCGGGCTGCGCAGC
Product: peptide methionine sulfoxide reductase
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MFLFRKRPAMPAPADALPGRPTPIPTAETHVVNGNPLKGPYPPGTGTIVLGLGCFWGAERRFWQLPEGVFVTAVGYAGGY TPNPTYEEVCTGRTGHNEVVLVAFDPAVLPLEAVVRTFFESHDPTQGMRQGNDVGTQYRSGIYTVGPDQDAAARSVRAAY AEALKARGFPDVTTEIRPLEQFYFAEAYHQQYLAKNPAGYCGLGGTGVSCPVGAGVAA
Sequences:
>Translated_218_residues MFLFRKRPAMPAPADALPGRPTPIPTAETHVVNGNPLKGPYPPGTGTIVLGLGCFWGAERRFWQLPEGVFVTAVGYAGGY TPNPTYEEVCTGRTGHNEVVLVAFDPAVLPLEAVVRTFFESHDPTQGMRQGNDVGTQYRSGIYTVGPDQDAAARSVRAAY AEALKARGFPDVTTEIRPLEQFYFAEAYHQQYLAKNPAGYCGLGGTGVSCPVGAGVAA >Mature_218_residues MFLFRKRPAMPAPADALPGRPTPIPTAETHVVNGNPLKGPYPPGTGTIVLGLGCFWGAERRFWQLPEGVFVTAVGYAGGY TPNPTYEEVCTGRTGHNEVVLVAFDPAVLPLEAVVRTFFESHDPTQGMRQGNDVGTQYRSGIYTVGPDQDAAARSVRAAY AEALKARGFPDVTTEIRPLEQFYFAEAYHQQYLAKNPAGYCGLGGTGVSCPVGAGVAA
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=202, Percent_Identity=58.4158415841584, Blast_Score=250, Evalue=8e-67, Organism=Homo sapiens, GI208609995, Length=184, Percent_Identity=59.7826086956522, Blast_Score=233, Evalue=7e-62, Organism=Homo sapiens, GI208609993, Length=202, Percent_Identity=44.0594059405941, Blast_Score=165, Evalue=2e-41, Organism=Escherichia coli, GI1790665, Length=198, Percent_Identity=55.5555555555556, Blast_Score=216, Evalue=9e-58, Organism=Caenorhabditis elegans, GI17533973, Length=145, Percent_Identity=37.9310344827586, Blast_Score=95, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6320881, Length=166, Percent_Identity=37.9518072289157, Blast_Score=109, Evalue=4e-25, Organism=Drosophila melanogaster, GI24664627, Length=147, Percent_Identity=36.0544217687075, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI45553131, Length=141, Percent_Identity=36.1702127659575, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24664631, Length=147, Percent_Identity=35.3741496598639, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 23265; Mature: 23265
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLFRKRPAMPAPADALPGRPTPIPTAETHVVNGNPLKGPYPPGTGTIVLGLGCFWGAER CCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECHHHHCCCC RFWQLPEGVFVTAVGYAGGYTPNPTYEEVCTGRTGHNEVVLVAFDPAVLPLEAVVRTFFE CEEECCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHH SHDPTQGMRQGNDVGTQYRSGIYTVGPDQDAAARSVRAAYAEALKARGFPDVTTEIRPLE CCCCHHHHHCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH QFYFAEAYHQQYLAKNPAGYCGLGGTGVSCPVGAGVAA HHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MFLFRKRPAMPAPADALPGRPTPIPTAETHVVNGNPLKGPYPPGTGTIVLGLGCFWGAER CCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECHHHHCCCC RFWQLPEGVFVTAVGYAGGYTPNPTYEEVCTGRTGHNEVVLVAFDPAVLPLEAVVRTFFE CEEECCCCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHH SHDPTQGMRQGNDVGTQYRSGIYTVGPDQDAAARSVRAAYAEALKARGFPDVTTEIRPLE CCCCHHHHHCCCHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH QFYFAEAYHQQYLAKNPAGYCGLGGTGVSCPVGAGVAA HHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA