| Definition | Methylobacterium radiotolerans JCM 2831 chromosome, complete genome. |
|---|---|
| Accession | NC_010505 |
| Length | 6,077,833 |
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The map label for this gene is 170750876
Identifier: 170750876
GI number: 170750876
Start: 4768548
End: 4768985
Strand: Direct
Name: 170750876
Synonym: Mrad2831_4487
Alternate gene names: NA
Gene position: 4768548-4768985 (Clockwise)
Preceding gene: 170750875
Following gene: 170750877
Centisome position: 78.46
GC content: 75.57
Gene sequence:
>438_bases GTGAGCCCCCTGCTGGAATCCTGGCGCTTCTGGGCGCTCGCCGCCGCCGGCTTCGCGGCGCTGACCGCGATCCTCGCCAA GGTCGGGGTCGCGGGCGTGCCGTCGGACGTCGCGACCTTCGTGCGCACCGCGGTGATCCTGGTCTTCGCGGGCGCGATCG TGGTCGTCTCCGGGCAGGCGGGCGGCCTCGCGCAGGTCACCGGCCGGAGCCTCGCCTTCCTCATCCTGTCGGGGCTCGCC ACCGGGGCGTCGTGGCTCTGCTACTTCCGCGCCCTGTCGCTGGGCGACGCCGCCCGCGTCGCGCCGCTCGACAAGCTCAG CGTCGTGCTGGTGGCGATCCTCGGCGCCACCCTGCTCGGCGAGACCCTCAGCCTCGCCGCCTGGGCCGGGGTCGCGCTGA TCGCGGCGGGCGCGGCCCTCGTCGCCTCCGGACTGTGA
Upstream 100 bases:
>100_bases GCAAGGAGTCGGACGCGGGCGCGCCGCCGCGCTGAATCGCTCCGCGCGCGAGGACGGTGATGCGCCCGCGCGCTGCCCTG AGAACCGACACGGGATCGCG
Downstream 100 bases:
>100_bases GATCATGCGCGCTGGCGCACCGATCCCTTAACGCGATGCGCGCATCCTGCGGTTGCCTCGCGAAAGGGGACCGTCATGGA ATGGGTTTATCGCGGCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF6 [H]
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSPLLESWRFWALAAAGFAALTAILAKVGVAGVPSDVATFVRTAVILVFAGAIVVVSGQAGGLAQVTGRSLAFLILSGLA TGASWLCYFRALSLGDAARVAPLDKLSVVLVAILGATLLGETLSLAAWAGVALIAAGAALVASGL
Sequences:
>Translated_145_residues MSPLLESWRFWALAAAGFAALTAILAKVGVAGVPSDVATFVRTAVILVFAGAIVVVSGQAGGLAQVTGRSLAFLILSGLA TGASWLCYFRALSLGDAARVAPLDKLSVVLVAILGATLLGETLSLAAWAGVALIAAGAALVASGL >Mature_144_residues SPLLESWRFWALAAAGFAALTAILAKVGVAGVPSDVATFVRTAVILVFAGAIVVVSGQAGGLAQVTGRSLAFLILSGLAT GASWLCYFRALSLGDAARVAPLDKLSVVLVAILGATLLGETLSLAAWAGVALIAAGAALVASGL
Specific function: Unknown
COG id: COG2510
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 14349; Mature: 14218
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLLESWRFWALAAAGFAALTAILAKVGVAGVPSDVATFVRTAVILVFAGAIVVVSGQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCC GGLAQVTGRSLAFLILSGLATGASWLCYFRALSLGDAARVAPLDKLSVVLVAILGATLLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHH ETLSLAAWAGVALIAAGAALVASGL HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SPLLESWRFWALAAAGFAALTAILAKVGVAGVPSDVATFVRTAVILVFAGAIVVVSGQA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEECCC GGLAQVTGRSLAFLILSGLATGASWLCYFRALSLGDAARVAPLDKLSVVLVAILGATLLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHH ETLSLAAWAGVALIAAGAALVASGL HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1655697 [H]