Click here to switch to the map view.

The map label for this gene is yagR [H]

Identifier: 170750875

GI number: 170750875

Start: 4766145

End: 4768412

Strand: Direct

Name: yagR [H]

Synonym: Mrad2831_4486

Alternate gene names: 170750875

Gene position: 4766145-4768412 (Clockwise)

Preceding gene: 170750874

Following gene: 170750876

Centisome position: 78.42

GC content: 70.59

Gene sequence:

>2268_bases
ATGACCCACACCTCCAGCCCCCAGACCTTCAGCTCCACCGGCCGCGACACCTTCGTCGGCAGCCCGCGCAGCCGCATCGA
CGGGCCCGCCAAGGTCACCGGCCTCGCCAAGTACGCGGGCGAGTTCGCCGCGCCCGACCTCGCCTACGGCTTCGTGGTGT
CGAGTTCGATCGCCAAGGGCCGGATCACCGGCATCGACTCCGCCGAGGCCGAGGCGGTGCCGGGCGTCCTCACGGTGCTC
ACCCACGAGAACCGGCCGCGCACCGCGTGGCGGGACAAGAACTTCCAGGACCAGGTGGCGCCCCCCGGCTCGCCGTTCCG
CGCCCTCTACGACGACCTGATCGTGTTCAGCGGTCAGCCGGTCGCCCTGGTGGTGGCGGAGGATTTCGAGACGGCGCGCT
ACGCCGCGTCCCTCGTCCGCGTGAGCTACGCGATGGAGGAGCCCGGGACCGACCTGGAGGCCCTGCGCGGCACCGCCTAC
GACCCGCCCTACAAGCGCACGGGCATCAAGCCGCCGCCGGAGCCCTGGGGCGACGCCGACACGGCGTTCGGCAGCGCGCC
GGTCCGCGTGCAGGGCGCCTACAGCCTCGCCGACGAGCACCACAACCCGATGGAGCCGCACGCCTCCACCGTGGTGGTCG
AGCAGGACGGCACCTACACGGTCTACGACAAGATCCAGGGCGTCTCGAACAGCCACCAGTACCTCACCAACGTCTTCGGC
CTGAAGCCCGATCAGGTGCGGGTGCTCAACCCCTATCTCGGCGGCGGCTTCGGCTCGGGCCTGCGCCCGCAGTACCAGCT
GTTCCTGGCGATGCTGGCCGCCCAGGAGCTGAAGCGCTCCGTGCGCGTGACCCTGACCCGCGACCAGTTGTGGAGCTTCA
CCTACCGGTCCGAGGCGCTGCAGACGATCGCGCTCGGTGCCGCGCCGGACGGGACGCTGACGGCCCTCCGCCACGACGCG
GTCCAGGGCACCTCGCAGTACGAGGATTACCAGGAGGTCGTCGTCAACTGGTCGGGTGTCCTCTACCGGTGCGACAACGT
CGCCCTGGGCTACCGGCTGGTGAAGCTCGACACGCCGACGCCCGGCGACATGCGCGCGCCCGGCGCGGTGACCGGCGTCT
TCGCGATCGAGACCGCGATGGACGAGCTCGCCTACGCGACCGGGCTCGACCCGATCGACCTGCGGCTGAAGAACTACGCC
GAGTCCGACGCCACCGCCGAGGGCAAGCCGTTCGGCTCGAAGGAGCTGAAGAGCTGCTTCCGGCAGGGCGCCGAGCGGTT
TGGCTGGGCGAGGCGCAGCCCCGAGCCCCGCTCCATGCGCGACGGCCGGGAACTCGTCGGCTGGGGGGTGGCCACCGGCA
TCTGGGAATCGATGATGATGCAGTCGAGCGCCATCGCGACCCTGACGCCGGACGGCCGCCTGACCGTCGGCAACTCCACC
GGCGACATCGGCACCGGCACCTACACGATCCTGACGCAGATCGCGGCCGACACGCTCGGCCTGCCGATGGACGCGGTGAC
GACCAAGCTCGGCGACACCCGCCTGCCGGAGGCCCCGGTCGCCGGCGGCTCGTGGACCGCCGCCTCCTCGGGCACCGCCG
TGATGAAGGCCTGCCGCAACGTCGGCGCGCAGGTGTTCAAGCTCGCCCGCGCCATGGAGAACTCGCCGCTCGCCAACGTC
GACTTCGACCGGGCCGTGTTCGCGGACGGCCGCATCGCGGTCGCGGGCGACCCGGGCCGCAGCGTCGCGCTGGTGGATGT
CCTGCAGGCGGCCGGCGTCGACAAGGTGGAGGCCGTCGAGGAGGCCGGGCCCGACAAGGACTTCAATCAGAAATACGAAG
CCTACACCCACTCGGCGATCTTCGCCGAGGTGAAGGTCGACGAGGAGCTGGGCCAGGTCCGGGTCACCCGCATCGTCTCG
GCGATCGCGGCCGGCAAGGTGCTGAACCCGAAGACGGCGCGCAGCCAGATCCTCGGCGGCGTGGTGATGGGGATCGGCTC
GGCGCTCGAGGAGGAGTCGATGCTCGACCACCGCATCGGCCGGTTCATGAACCACAATCTCGGCGAGTACCACGTGCCCG
TCCACGCCGACATCTACGACATCGACGTGATCTTCGTGGAGGAGGAGGACAAGGCGAACCCGCTGGGCGTGAAGGGGCTC
GGCGAGATCGGCATCGTCGGCACCGCGGCGGCGATCGCCAACGCGGTCTTCCACGCCACCGGCAGGCGGGTGCGCGACCT
GCCGATCACCGTCGACAAGCTCCTGTGA

Upstream 100 bases:

>100_bases
AGATCGATCTCGCCCGGCGGGCCATCGTGCGCGGCCTCGAGCAGGCCGCCGCCGGCACGCCCCAGTCGCTCAGCGACAAG
CGCATCCAGTAGGTCCCGCC

Downstream 100 bases:

>100_bases
GCGGCGAATGTTTCACAGGAAACATTGACGGTTCGGCAAGGAGTCGGACGCGGGCGCGCCGCCGCGCTGAATCGCTCCGC
GCGCGAGGACGGTGATGCGC

Product: molybdopterin binding aldehyde oxidase and xanthine dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 755; Mature: 754

Protein sequence:

>755_residues
MTHTSSPQTFSSTGRDTFVGSPRSRIDGPAKVTGLAKYAGEFAAPDLAYGFVVSSSIAKGRITGIDSAEAEAVPGVLTVL
THENRPRTAWRDKNFQDQVAPPGSPFRALYDDLIVFSGQPVALVVAEDFETARYAASLVRVSYAMEEPGTDLEALRGTAY
DPPYKRTGIKPPPEPWGDADTAFGSAPVRVQGAYSLADEHHNPMEPHASTVVVEQDGTYTVYDKIQGVSNSHQYLTNVFG
LKPDQVRVLNPYLGGGFGSGLRPQYQLFLAMLAAQELKRSVRVTLTRDQLWSFTYRSEALQTIALGAAPDGTLTALRHDA
VQGTSQYEDYQEVVVNWSGVLYRCDNVALGYRLVKLDTPTPGDMRAPGAVTGVFAIETAMDELAYATGLDPIDLRLKNYA
ESDATAEGKPFGSKELKSCFRQGAERFGWARRSPEPRSMRDGRELVGWGVATGIWESMMMQSSAIATLTPDGRLTVGNST
GDIGTGTYTILTQIAADTLGLPMDAVTTKLGDTRLPEAPVAGGSWTAASSGTAVMKACRNVGAQVFKLARAMENSPLANV
DFDRAVFADGRIAVAGDPGRSVALVDVLQAAGVDKVEAVEEAGPDKDFNQKYEAYTHSAIFAEVKVDEELGQVRVTRIVS
AIAAGKVLNPKTARSQILGGVVMGIGSALEEESMLDHRIGRFMNHNLGEYHVPVHADIYDIDVIFVEEEDKANPLGVKGL
GEIGIVGTAAAIANAVFHATGRRVRDLPITVDKLL

Sequences:

>Translated_755_residues
MTHTSSPQTFSSTGRDTFVGSPRSRIDGPAKVTGLAKYAGEFAAPDLAYGFVVSSSIAKGRITGIDSAEAEAVPGVLTVL
THENRPRTAWRDKNFQDQVAPPGSPFRALYDDLIVFSGQPVALVVAEDFETARYAASLVRVSYAMEEPGTDLEALRGTAY
DPPYKRTGIKPPPEPWGDADTAFGSAPVRVQGAYSLADEHHNPMEPHASTVVVEQDGTYTVYDKIQGVSNSHQYLTNVFG
LKPDQVRVLNPYLGGGFGSGLRPQYQLFLAMLAAQELKRSVRVTLTRDQLWSFTYRSEALQTIALGAAPDGTLTALRHDA
VQGTSQYEDYQEVVVNWSGVLYRCDNVALGYRLVKLDTPTPGDMRAPGAVTGVFAIETAMDELAYATGLDPIDLRLKNYA
ESDATAEGKPFGSKELKSCFRQGAERFGWARRSPEPRSMRDGRELVGWGVATGIWESMMMQSSAIATLTPDGRLTVGNST
GDIGTGTYTILTQIAADTLGLPMDAVTTKLGDTRLPEAPVAGGSWTAASSGTAVMKACRNVGAQVFKLARAMENSPLANV
DFDRAVFADGRIAVAGDPGRSVALVDVLQAAGVDKVEAVEEAGPDKDFNQKYEAYTHSAIFAEVKVDEELGQVRVTRIVS
AIAAGKVLNPKTARSQILGGVVMGIGSALEEESMLDHRIGRFMNHNLGEYHVPVHADIYDIDVIFVEEEDKANPLGVKGL
GEIGIVGTAAAIANAVFHATGRRVRDLPITVDKLL
>Mature_754_residues
THTSSPQTFSSTGRDTFVGSPRSRIDGPAKVTGLAKYAGEFAAPDLAYGFVVSSSIAKGRITGIDSAEAEAVPGVLTVLT
HENRPRTAWRDKNFQDQVAPPGSPFRALYDDLIVFSGQPVALVVAEDFETARYAASLVRVSYAMEEPGTDLEALRGTAYD
PPYKRTGIKPPPEPWGDADTAFGSAPVRVQGAYSLADEHHNPMEPHASTVVVEQDGTYTVYDKIQGVSNSHQYLTNVFGL
KPDQVRVLNPYLGGGFGSGLRPQYQLFLAMLAAQELKRSVRVTLTRDQLWSFTYRSEALQTIALGAAPDGTLTALRHDAV
QGTSQYEDYQEVVVNWSGVLYRCDNVALGYRLVKLDTPTPGDMRAPGAVTGVFAIETAMDELAYATGLDPIDLRLKNYAE
SDATAEGKPFGSKELKSCFRQGAERFGWARRSPEPRSMRDGRELVGWGVATGIWESMMMQSSAIATLTPDGRLTVGNSTG
DIGTGTYTILTQIAADTLGLPMDAVTTKLGDTRLPEAPVAGGSWTAASSGTAVMKACRNVGAQVFKLARAMENSPLANVD
FDRAVFADGRIAVAGDPGRSVALVDVLQAAGVDKVEAVEEAGPDKDFNQKYEAYTHSAIFAEVKVDEELGQVRVTRIVSA
IAAGKVLNPKTARSQILGGVVMGIGSALEEESMLDHRIGRFMNHNLGEYHVPVHADIYDIDVIFVEEEDKANPLGVKGLG
EIGIVGTAAAIANAVFHATGRRVRDLPITVDKLL

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI71773480, Length=766, Percent_Identity=24.2819843342037, Blast_Score=130, Evalue=5e-30,
Organism=Homo sapiens, GI91823271, Length=684, Percent_Identity=21.4912280701754, Blast_Score=108, Evalue=2e-23,
Organism=Escherichia coli, GI1786478, Length=741, Percent_Identity=39.8110661268556, Blast_Score=458, Evalue=1e-130,
Organism=Escherichia coli, GI1789230, Length=753, Percent_Identity=28.6852589641434, Blast_Score=245, Evalue=1e-65,
Organism=Escherichia coli, GI1789246, Length=831, Percent_Identity=27.0758122743682, Blast_Score=194, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17540638, Length=681, Percent_Identity=22.7606461086637, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24647199, Length=736, Percent_Identity=22.8260869565217, Blast_Score=139, Evalue=9e-33,
Organism=Drosophila melanogaster, GI24647193, Length=752, Percent_Identity=23.5372340425532, Blast_Score=133, Evalue=4e-31,
Organism=Drosophila melanogaster, GI17737937, Length=716, Percent_Identity=24.8603351955307, Blast_Score=128, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24647195, Length=769, Percent_Identity=22.7568270481144, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24647197, Length=764, Percent_Identity=22.7748691099476, Blast_Score=118, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24647201, Length=741, Percent_Identity=20.6477732793522, Blast_Score=102, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 81041; Mature: 80910

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHTSSPQTFSSTGRDTFVGSPRSRIDGPAKVTGLAKYAGEFAAPDLAYGFVVSSSIAKG
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
RITGIDSAEAEAVPGVLTVLTHENRPRTAWRDKNFQDQVAPPGSPFRALYDDLIVFSGQP
CCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCC
VALVVAEDFETARYAASLVRVSYAMEEPGTDLEALRGTAYDPPYKRTGIKPPPEPWGDAD
EEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCC
TAFGSAPVRVQGAYSLADEHHNPMEPHASTVVVEQDGTYTVYDKIQGVSNSHQYLTNVFG
CCCCCCCEEEECCHHHHHCCCCCCCCCCCEEEEECCCCEEEEHHHCCCCCHHHHHHHHHC
LKPDQVRVLNPYLGGGFGSGLRPQYQLFLAMLAAQELKRSVRVTLTRDQLWSFTYRSEAL
CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHH
QTIALGAAPDGTLTALRHDAVQGTSQYEDYQEVVVNWSGVLYRCDNVALGYRLVKLDTPT
HHEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEEEEEEEEECCCC
PGDMRAPGAVTGVFAIETAMDELAYATGLDPIDLRLKNYAESDATAEGKPFGSKELKSCF
CCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RQGAERFGWARRSPEPRSMRDGRELVGWGVATGIWESMMMQSSAIATLTPDGRLTVGNST
HHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCC
GDIGTGTYTILTQIAADTLGLPMDAVTTKLGDTRLPEAPVAGGSWTAASSGTAVMKACRN
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VGAQVFKLARAMENSPLANVDFDRAVFADGRIAVAGDPGRSVALVDVLQAAGVDKVEAVE
HHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHH
EAGPDKDFNQKYEAYTHSAIFAEVKVDEELGQVRVTRIVSAIAAGKVLNPKTARSQILGG
HCCCCCCHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VVMGIGSALEEESMLDHRIGRFMNHNLGEYHVPVHADIYDIDVIFVEEEDKANPLGVKGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECEEECCEEEEEEEEEECCCCCCCCCCCCC
GEIGIVGTAAAIANAVFHATGRRVRDLPITVDKLL
CCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHCC
>Mature Secondary Structure 
THTSSPQTFSSTGRDTFVGSPRSRIDGPAKVTGLAKYAGEFAAPDLAYGFVVSSSIAKG
CCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCC
RITGIDSAEAEAVPGVLTVLTHENRPRTAWRDKNFQDQVAPPGSPFRALYDDLIVFSGQP
CCCCCCCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCC
VALVVAEDFETARYAASLVRVSYAMEEPGTDLEALRGTAYDPPYKRTGIKPPPEPWGDAD
EEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCC
TAFGSAPVRVQGAYSLADEHHNPMEPHASTVVVEQDGTYTVYDKIQGVSNSHQYLTNVFG
CCCCCCCEEEECCHHHHHCCCCCCCCCCCEEEEECCCCEEEEHHHCCCCCHHHHHHHHHC
LKPDQVRVLNPYLGGGFGSGLRPQYQLFLAMLAAQELKRSVRVTLTRDQLWSFTYRSEAL
CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHHHH
QTIALGAAPDGTLTALRHDAVQGTSQYEDYQEVVVNWSGVLYRCDNVALGYRLVKLDTPT
HHEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEEEEEEEEECCCC
PGDMRAPGAVTGVFAIETAMDELAYATGLDPIDLRLKNYAESDATAEGKPFGSKELKSCF
CCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
RQGAERFGWARRSPEPRSMRDGRELVGWGVATGIWESMMMQSSAIATLTPDGRLTVGNST
HHHHHHHCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCC
GDIGTGTYTILTQIAADTLGLPMDAVTTKLGDTRLPEAPVAGGSWTAASSGTAVMKACRN
CCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
VGAQVFKLARAMENSPLANVDFDRAVFADGRIAVAGDPGRSVALVDVLQAAGVDKVEAVE
HHHHHHHHHHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHHCCCCHHHHHH
EAGPDKDFNQKYEAYTHSAIFAEVKVDEELGQVRVTRIVSAIAAGKVLNPKTARSQILGG
HCCCCCCHHHHHHHHHHHEEEEEEEECHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
VVMGIGSALEEESMLDHRIGRFMNHNLGEYHVPVHADIYDIDVIFVEEEDKANPLGVKGL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECEEECCEEEEEEEEEECCCCCCCCCCCCC
GEIGIVGTAAAIANAVFHATGRRVRDLPITVDKLL
CCCCHHHHHHHHHHHHHHHCCCEEECCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]